RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 CCDC160A6NGH7 325 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 NPFFO15130 113 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 OMGP23515 440 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 NFYBP25208 207 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 SSTR5P35346 364 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 LGALS4P56470 323 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 DYNC1I2Q13409 638 aaKnown RBP11.32□□□□□ -0.6
TUBB3-202ENST00000553656 C9orf139Q6ZV77 190 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 PNKDQ8N490 385 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 SETD6Q8TBK2 473 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 ARL11Q969Q4 196 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 SLC6A7Q99884 636 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 CMSS1Q9BQ75 279 aaKnown RBP11.32□□□□□ -0.6
TUBB3-202ENST00000553656 PECRQ9BY49 303 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 TMEM133Q9H2Q1 129 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 C12orf4Q9NQ89 552 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 IDI2-AS1Q9NZ38 188 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 AK3Q9UIJ7 227 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 SPATA2Q9UM82 520 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 FAM96BQ9Y3D0 163 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 DSCAML1Q8TD84 2053 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 NAV3Q8IVL0 2385 aa11.32□□□□□ -0.6
TUBB3-202ENST00000553656 MEIOCA2RUB1 952 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 FOXI3A8MTJ6 420 aaPredicted RBP11.31□□□□□ -0.6
TUBB3-202ENST00000553656 RAB27BO00194 218 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 SPINT2O43291 252 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 ORC5O43913 435 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 CD3GP09693 182 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 HIST1H1DP16402 221 aaKnown RBP11.31□□□□□ -0.6
TUBB3-202ENST00000553656 SOX6P35712 828 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 LTC4SQ16873 150 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 C17orf58Q2M2W7 97 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 MOGAT2Q3SYC2 334 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 MIDNQ504T8 468 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 PLAC9Q5JTB6 97 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 MOB1BQ7L9L4 216 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 BCL6BQ8N143 479 aaPredicted RBP11.31□□□□□ -0.6
TUBB3-202ENST00000553656 GAPTQ8N292 157 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 PRR18Q8N4B5 295 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 OR10A7Q8NGE5 316 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 OR5H6Q8NGV6 325 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 RFESDQ8TAC1 157 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 MRPL30Q8TCC3 161 aaKnown RBP11.31□□□□□ -0.6
TUBB3-202ENST00000553656 ACOT12Q8WYK0 555 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 ZDHHC16Q969W1 377 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 CLEC7AQ9BXN2 247 aa11.31□□□□□ -0.6
TUBB3-202ENST00000553656 IGHV2-26A0A0B4J1V2 119 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 SERPINE3A8MV23 424 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 TOR1AO14656 332 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 TCF21O43680 179 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 ARG1P05089 322 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 GNB3P16520 340 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 SAA4P35542 130 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 TALDO1P37837 337 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 TMEM50BP56557 158 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 ARFRP1Q13795 201 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 TMEM30BQ3MIR4 351 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 UBE2NLQ5JXB2 153 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 HCP5Q6MZN7 132 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 MZT2AQ6P582 158 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 ZNF554Q86TJ5 538 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 RTN4RL2Q86UN3 420 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 SAMD12Q8N8I0 201 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 KIRREL1Q96J84 757 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 JMJD8Q96S16 334 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 LINC00574Q9H8X3 128 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 DIABLOQ9NR28 239 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 MGAT4AQ9UM21 535 aa11.3□□□□□ -0.6
TUBB3-202ENST00000553656 A0A0A6YYH2 397 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 A0A0A6YYJ9 748 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 FAM172BPA6NC97 362 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 A6NJ64 397 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 POM121CA8CG34 1229 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 C12orf77C9JDV5 145 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 NPIPB11E5RHQ5 1161 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 SDCBPO00560 298 aaPredicted RBP11.29□□□□□ -0.6
TUBB3-202ENST00000553656 MFNGO00587 321 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 MMP23AO75900 390 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 NAPSAO96009 420 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 FBP1P09467 338 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 CGB3P0DN86 165 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 CGB7P0DN87 165 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 ZNF182P17025 639 aaPredicted RBP11.29□□□□□ -0.6
TUBB3-202ENST00000553656 RCC1P18754 421 aaPredicted RBP11.29□□□□□ -0.6
TUBB3-202ENST00000553656 ABHD12Q8N2K0 398 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 SIGLECL1Q8N7X8 197 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 OR11H6Q8NGC7 330 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 ZNF596Q8TC21 504 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 ISOC1Q96CN7 298 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 SLC25A38Q96DW6 304 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 S100A16Q96FQ6 103 aaKnown RBP11.29□□□□□ -0.6
TUBB3-202ENST00000553656 HDHD3Q9BSH5 251 aaPredicted RBP11.29□□□□□ -0.6
TUBB3-202ENST00000553656 ZMAT3Q9HA38 289 aaKnown RBP11.29□□□□□ -0.6
TUBB3-202ENST00000553656 TAF9BQ9HBM6 251 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 MBNL3Q9NUK0 354 aaKnown RBP11.29□□□□□ -0.6
TUBB3-202ENST00000553656 COMMD3Q9UBI1 195 aa11.29□□□□□ -0.6
TUBB3-202ENST00000553656 A0A0U1RQK1 487 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 H3BMQ9 156 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 C15orf65H3BRN8 121 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms