RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 NPFFR1Q9GZQ6 430 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 BANF2Q9H503 90 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 FBLN5Q9UBX5 448 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 TCF19Q9Y242 345 aa12.39□□□□□ -0.43
SHMT2-204ENST00000553324 AMMECR1Q9Y4X0 333 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-204ENST00000553324 OOSP1A8MZH6 123 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 BUB1B-PAK6H3BSN5 160 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 F2RL2O00254 374 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 BPNT1O95861 308 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 PAX6P26367 422 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 RPS25P62851 125 aaKnown RBP12.38□□□□□ -0.43
SHMT2-204ENST00000553324 EMX1Q04741 257 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-204ENST00000553324 HLA-DRB5Q30154 266 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 LDLRAD2Q5SZI1 272 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 BRICD5Q6PL45 260 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 TMEM91Q6ZNR0 172 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 DYNAPQ8N1N2 210 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 TMEM104Q8NE00 496 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 OR52M1Q8NGK5 317 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 OR6M1Q8NGM8 313 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 OR4C13Q8NGP0 309 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 MMP28Q9H239 520 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 ZNF286AQ9HBT8 521 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 ETAA1Q9NY74 926 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 LRRC42Q9Y546 428 aa12.38□□□□□ -0.43
SHMT2-204ENST00000553324 J3QR06 171 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 AIPO00170 330 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 SLC22A1O15245 554 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 GDNFP39905 211 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 MNDAP41218 407 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 RAB13P51153 203 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 TMEM30BQ3MIR4 351 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 PLA1AQ53H76 456 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 TRAT1Q6PIZ9 186 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 BAIAP2L2Q6UXY1 529 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 RFESDQ8TAC1 157 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 WFDC12Q8WWY7 111 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 ARL11Q969Q4 196 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 NEDD4LQ96PU5 975 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 ZNF696Q9H7X3 374 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 ZNF581Q9P0T4 197 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 TRAPPC2LQ9UL33 140 aa12.37□□□□□ -0.43
SHMT2-204ENST00000553324 DSCAML1Q8TD84 2053 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 A6NDX4 124 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 PDCD6O75340 191 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 MPIG6BO95866 241 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 VSIG8P0DPA2 414 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 ARSBP15848 533 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 GALP22466 123 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 CALRP27797 417 aaKnown RBP12.36□□□□□ -0.43
SHMT2-204ENST00000553324 SSTR5P35346 364 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 PROK1P58294 105 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 FABP5Q01469 135 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 Q3ZCU0 254 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 C6orf183Q5T699 404 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 SYT6Q5T7P8 510 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-204ENST00000553324 C16orf82Q7Z2V1 217 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 GAPTQ8N292 157 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 OR2T6Q8NHC8 308 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 FCGR1BQ92637 280 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 FAM46BQ96A09 425 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 AKR1E2Q96JD6 320 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 TMEM59Q9BXS4 323 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 PLGRKTQ9HBL7 147 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 PSG11Q9UQ72 335 aa12.36□□□□□ -0.43
SHMT2-204ENST00000553324 RRP15Q9Y3B9 282 aaKnown RBP12.36□□□□□ -0.43
SHMT2-204ENST00000553324 FAM172BPA6NC97 362 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 LY6LH3BQJ8 138 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 C15orf65H3BRN8 121 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 SLC17A2O00624 439 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 PDCD5O14737 125 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 SPINT2O43291 252 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 RPS27AP62979 156 aaKnown RBP12.35□□□□□ -0.43
SHMT2-204ENST00000553324 MADCAM1Q13477 382 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 TPTE2P1Q5T6R2 138 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 OR2W3Q7Z3T1 314 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 ZNF554Q86TJ5 538 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 SPARTQ8N0X7 666 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 C8orf31Q8N9H6 132 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 CCDC107Q8WV48 283 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 CAPSLQ8WWF8 208 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 RPEQ96AT9 228 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 CITED1Q99966 193 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 URM1Q9BTM9 101 aaKnown RBP12.35□□□□□ -0.43
SHMT2-204ENST00000553324 TM2D1Q9BX74 207 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 KCNIP1Q9NZI2 227 aa12.35□□□□□ -0.43
SHMT2-204ENST00000553324 AK6Q9Y3D8 172 aaKnown RBP12.35□□□□□ -0.43
SHMT2-204ENST00000553324 KIAA2026Q5HYC2 2103 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 TRAV1-2A0A0B4J238 106 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 TRAV39A0A0B4J263 110 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 TMEM14DPA8MWL7 114 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 CCRL2O00421 344 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 SDCBPO00560 298 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-204ENST00000553324 TIMM23O14925 209 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 FAM106CPP0CH98 169 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 RAB7AP51149 207 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 RAB11BQ15907 218 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 LTC4SQ16873 150 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 PRR31Q5SQ13 230 aa12.34□□□□□ -0.43
SHMT2-204ENST00000553324 UBE2UQ5VVX9 321 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms