RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 COILP38432 576 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-209ENST00000553280 RAB2AP61019 212 aa2.81□□□□□ -1.96
SCFD1-209ENST00000553280 CASP8Q14790 479 aa2.81□□□□□ -1.96
SCFD1-209ENST00000553280 MMDQ15546 238 aa2.81□□□□□ -1.96
SCFD1-209ENST00000553280 C4orf26Q17RF5 130 aa2.81□□□□□ -1.96
SCFD1-209ENST00000553280 DNAL1Q4LDG9 190 aa2.81□□□□□ -1.96
SCFD1-209ENST00000553280 CDKL4Q5MAI5 379 aa2.81□□□□□ -1.96
SCFD1-209ENST00000553280 DNM1P34Q6PK57 102 aa2.81□□□□□ -1.96
SCFD1-209ENST00000553280 XKRXQ6PP77 449 aa2.81□□□□□ -1.96
SCFD1-209ENST00000553280 TMEM251Q8N6I4 163 aa2.81□□□□□ -1.96
SCFD1-209ENST00000553280 OR5D18Q8NGL1 313 aa2.81□□□□□ -1.96
SCFD1-209ENST00000553280 OR11L1Q8NGX0 322 aa2.81□□□□□ -1.96
SCFD1-209ENST00000553280 SPANXB1Q9NS25 103 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-209ENST00000553280 ZNF586Q9NXT0 402 aa2.81□□□□□ -1.96
SCFD1-209ENST00000553280 DHCR7Q9UBM7 475 aaKnown RBP2.81□□□□□ -1.96
SCFD1-209ENST00000553280 TP53TG1Q9Y2A0 90 aa2.81□□□□□ -1.96
SCFD1-209ENST00000553280 TRAPPC1Q9Y5R8 145 aa2.81□□□□□ -1.96
SCFD1-209ENST00000553280 TICRRQ7Z2Z1 1910 aa2.81□□□□□ -1.96
SCFD1-209ENST00000553280 DNMT1P26358 1616 aaKnown RBP2.8□□□□□ -1.96
SCFD1-209ENST00000553280 M0QYV0 167 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 ZW10O43264 779 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 PDYNP01213 254 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 CD34P28906 385 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 UBE2IP63279 158 aaKnown RBP2.8□□□□□ -1.96
SCFD1-209ENST00000553280 FMODQ06828 376 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 MGAT3Q09327 533 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 HLA-DRB5Q30154 266 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 SLC36A2Q495M3 483 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 ZCWPW2Q504Y3 356 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 KHDRBS2Q5VWX1 349 aaKnown RBP2.8□□□□□ -1.96
SCFD1-209ENST00000553280 IGFL3Q6UXB1 125 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 RPRMLQ8N4K4 120 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 C3orf22Q8N5N4 141 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 TMEM156Q8N614 296 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 OR4C13Q8NGP0 309 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 CMBLQ96DG6 245 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 CMTM5Q96DZ9 223 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 SMIM19Q96E16 107 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 MIA3Q5JRA6 1907 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 LOXHD1Q8IVV2 1947 aa2.8□□□□□ -1.96
SCFD1-209ENST00000553280 BAZ2AQ9UIF9 1905 aaKnown RBP2.8□□□□□ -1.96
SCFD1-209ENST00000553280 OR5H14A6NHG9 310 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 A8MWP4 228 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 H3BQ85 93 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 BIRC5O15392 142 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 PSMG1O95456 288 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 ASS1P00966 412 aaKnown RBP2.79□□□□□ -1.96
SCFD1-209ENST00000553280 IGKV1D-33P01593 117 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 IGKV1-33P01594 117 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 COX5BP10606 129 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 ZNF14P17017 642 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-209ENST00000553280 GADD45AP24522 165 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 S100A2P29034 98 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 ADORA1P30542 326 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 TGFBR2P37173 567 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 ANP32AP39687 249 aaKnown RBP2.79□□□□□ -1.96
SCFD1-209ENST00000553280 MAGEA2P43356 314 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 LDLRAD2Q5SZI1 272 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 LAIR2Q6ISS4 152 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 TMEM136Q6ZRR5 245 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 FAM19A5Q7Z5A7 132 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-209ENST00000553280 RIBC1Q8N443 379 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-209ENST00000553280 C2orf73Q8N5S3 287 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-209ENST00000553280 OR5K1Q8NHB7 308 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 B9D2Q9BPU9 175 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 TMEM208Q9BTX3 173 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 TRIM45Q9H8W5 580 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-209ENST00000553280 USE1Q9NZ43 259 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.79□□□□□ -1.96
SCFD1-209ENST00000553280 ICOSQ9Y6W8 199 aa2.79□□□□□ -1.96
SCFD1-209ENST00000553280 MAP3K5Q99683 1374 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 ZNF729A6NN14 1252 aaPredicted RBP2.78□□□□□ -1.96
SCFD1-209ENST00000553280 F5H768 121 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 LTAP01374 205 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 TRGV3P03979 118 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 OCM2P0CE71 109 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 CTSEP14091 401 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 CFL1P23528 166 aaKnown RBP2.78□□□□□ -1.96
SCFD1-209ENST00000553280 AGTR1P30556 359 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 CDC34P49427 236 aaPredicted RBP2.78□□□□□ -1.96
SCFD1-209ENST00000553280 BIKQ13323 160 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 CENPWQ5EE01 88 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 PRR9Q5T870 116 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 HENMT1Q5T8I9 393 aaKnown RBP2.78□□□□□ -1.96
SCFD1-209ENST00000553280 PTRHD1Q6GMV3 140 aaKnown RBP2.78□□□□□ -1.96
SCFD1-209ENST00000553280 ZNF561Q8N587 486 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 KRTCAP2Q8N6L1 136 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 FER1L6-AS1Q8NA97 138 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 OR9I1Q8NGQ6 314 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 ZNRF2Q8NHG8 242 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 PPCDCQ96CD2 204 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 MBOAT7Q96N66 472 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 SLC22A4Q9H015 551 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 NSRP1Q9H0G5 558 aaKnown RBP2.78□□□□□ -1.96
SCFD1-209ENST00000553280 GABARAPL1Q9H0R8 117 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 ALX4Q9H161 411 aaPredicted RBP2.78□□□□□ -1.96
SCFD1-209ENST00000553280 UBQLN4Q9NRR5 601 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 TMEM216Q9P0N5 145 aa2.78□□□□□ -1.96
SCFD1-209ENST00000553280 BRWD3Q6RI45 1802 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms