RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 TMEM33P57088 247 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 ERVK11-1P61568 191 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 VBP1P61758 197 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 NCS1P62166 190 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 HAGHLQ6PII5 290 aaPredicted RBP5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 ZNF826PQ6ZT77 177 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 RNF144BQ7Z419 303 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 NR2C2APQ86WQ0 139 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 CROCCP3Q8IVE0 287 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 Q8IYB0 196 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 C1orf87Q8N0U7 546 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 JAGN1Q8N5M9 183 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 GCSAMQ8N6F7 178 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 RNF152Q8N8N0 203 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 POC1AQ8NBT0 407 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 Q8NFD4 153 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 OR6M1Q8NGM8 313 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 OR11L1Q8NGX0 322 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 OR51F2Q8NH61 342 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 CCL17Q92583 94 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 YIPF5Q969M3 257 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 SLC25A28Q96A46 364 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 ISOC1Q96CN7 298 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 SPACA5Q96QH8 159 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 GPER1Q99527 375 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 NRIP2Q9BQI9 281 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 FAM234AQ9H0X4 552 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 RNF167Q9H6Y7 350 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 HES4Q9HCC6 221 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 BATF3Q9NR55 127 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 TMEM106BQ9NUM4 274 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 UFSP2Q9NUQ7 469 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 C1orf123Q9NWV4 160 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 RASL12Q9NYN1 266 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 IL36GQ9NZH8 169 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 MTCH1Q9NZJ7 389 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 GHRLQ9UBU3 117 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 AK6Q9Y3D8 172 aaKnown RBP5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 NPTNQ9Y639 398 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 V9GY05 133 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 DOCK11Q5JSL3 2073 aa5.28□□□□□ -1.56
DEPDC4-210ENST00000551642 IGLV5-39A0A0G2JS06 123 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 IGHV3-64DA0A0J9YX35 117 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 hCG_1807616A0A1W2PRN6 198 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 DPPA5A6NC42 116 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 CLDN25C9JDP6 229 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 TRAPPC2LH3BP13 241 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 AIPO00170 330 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 PRYO14603 147 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 WNT9BO14905 357 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 NOL3O60936 208 aaKnown RBP5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 ZNF780AO75290 641 aaPredicted RBP5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 RHBDL1O75783 438 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 KDM4BO94953 1096 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 CDRT1O95170 752 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 CYB5R3P00387 301 aaPredicted RBP5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 MSMBP08118 114 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 UBBP0CG47 229 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 MUC1P15941 1255 aaPredicted RBP5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 HTR2CP28335 458 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 TGFBR1P36897 503 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 OR3A4PP47883 348 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 SERPINB10P48595 397 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 BMXP51813 675 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 CAPZA1P52907 286 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 OR10A3P58181 314 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 LSM3P62310 102 aaKnown RBP5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 MXD1Q05195 221 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 GPR176Q14439 515 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 SLC9A3R2Q15599 337 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 TEX36Q5VZQ5 186 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 OLFML2AQ68BL7 652 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 ELP2Q6IA86 826 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 SFXN4Q6P4A7 337 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 SLC25A26Q70HW3 274 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 OR4D6Q8NGJ1 314 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 OR5D18Q8NGL1 313 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 LRRC29Q8WV35 223 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 TNFAIP8L1Q8WVP5 186 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 RFT1Q96AA3 541 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 SLC25A46Q96AG3 418 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 C12orf43Q96C57 262 aaKnown RBP5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 MRPS24Q96EL2 167 aaKnown RBP5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 CEP19Q96LK0 163 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 S100A13Q99584 98 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 DCSTAMPQ9H295 470 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 SEBOXQ9HB31 216 aaPredicted RBP5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 PCDHB16Q9NRJ7 776 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 RSL24D1Q9UHA3 163 aaKnown RBP5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 MRPS28Q9Y2Q9 187 aaKnown RBP5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 CACNG2Q9Y698 323 aa5.27□□□□□ -1.57
DEPDC4-210ENST00000551642 PPIAL4EA0A075B759 164 aa5.26□□□□□ -1.57
DEPDC4-210ENST00000551642 TRAV38-1A0A0B4J264 116 aa5.26□□□□□ -1.57
DEPDC4-210ENST00000551642 IGKV1-12A0A0C4DH73 117 aa5.26□□□□□ -1.57
DEPDC4-210ENST00000551642 OOEPA6NGQ2 149 aa5.26□□□□□ -1.57
DEPDC4-210ENST00000551642 PPIAL4DF5H284 164 aa5.26□□□□□ -1.57
DEPDC4-210ENST00000551642 F8VVB4 439 aa5.26□□□□□ -1.57
DEPDC4-210ENST00000551642 F8VWA3 439 aa5.26□□□□□ -1.57
DEPDC4-210ENST00000551642 LYNX1G3V0Z9 82 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms