RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 KCNIP2Q9NS61 270 aa1.28□□□□□ -2.2
SCAF11-215ENST00000551391 YLPM1P49750 1951 aaKnown RBP1.28□□□□□ -2.2
SCAF11-215ENST00000551391 COL18A1P39060 1754 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 RAB3GAP2Q9H2M9 1393 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 A0A1B0GW15 77 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 GOLGA8IPA6NC78 632 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 ARGFXA6NJG6 315 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 FABP7O15540 132 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 SLC25A20O43772 301 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 CRTAPO75718 401 aaPredicted RBP1.27□□□□□ -2.21
SCAF11-215ENST00000551391 CD99P14209 185 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 CRABP1P29762 137 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 KCNJ3P48549 501 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 TNNC1P63316 161 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 PAFAH1B3Q15102 231 aaKnown RBP1.27□□□□□ -2.21
SCAF11-215ENST00000551391 OR8G1Q15617 311 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 KRTAP13-4Q3LI77 160 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 PCOTHQ58A44 107 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 FAM19A3Q7Z5A8 133 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 MFSD8Q8NHS3 518 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 FAAP24Q9BTP7 215 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 PRRG3Q9BZD7 231 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 ZNF286AQ9HBT8 521 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 MTCH2Q9Y6C9 303 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 DOCK6Q96HP0 2047 aa1.27□□□□□ -2.21
SCAF11-215ENST00000551391 COL11A1P12107 1806 aaPredicted RBP1.26□□□□□ -2.21
SCAF11-215ENST00000551391 ADAMTS7Q9UKP4 1686 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 USP42Q9H9J4 1324 aaKnown RBP1.26□□□□□ -2.21
SCAF11-215ENST00000551391 C8orf87E5RJ46 101 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 LY6LH3BQJ8 138 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 S1PR2O95136 353 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 EPPINO95925 133 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 S100A9P06702 114 aaKnown RBP1.26□□□□□ -2.21
SCAF11-215ENST00000551391 IFI30P13284 250 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 AKR1C4P17516 323 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 AQP5P55064 265 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 MP68P56378 58 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 ACSBG2Q5FVE4 666 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 TCF23Q7RTU1 214 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 TMEM25Q86YD3 366 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 DNAAF3Q8N9W5 541 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 PDCD6IPQ8WUM4 868 aaKnown RBP1.26□□□□□ -2.21
SCAF11-215ENST00000551391 IFT81Q8WYA0 676 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 PGLYRP3Q96LB9 341 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 TAPBPLQ9BX59 468 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 IFT46Q9NQC8 304 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 PSORS1C2Q9UIG4 136 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 CCL26Q9Y258 94 aa1.26□□□□□ -2.21
SCAF11-215ENST00000551391 MYO9BQ13459 2157 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 ABCB11O95342 1321 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 IGKV1-12A0A0C4DH73 117 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 A0A1B0GX12 115 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 A8MWP6 167 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 F5H5T6 163 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 OVOL1O14753 267 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 LDOC1O95751 146 aaPredicted RBP1.25□□□□□ -2.21
SCAF11-215ENST00000551391 IGKV1D-12P01611 117 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 APOA1P02647 267 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 IGKV1-16P04430 117 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 RAB2AP61019 212 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 FOXF1Q12946 379 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 TMEM176BQ3YBM2 270 aaPredicted RBP1.25□□□□□ -2.21
SCAF11-215ENST00000551391 HES3Q5TGS1 186 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 Q6ZRU5 148 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 AHSA2Q719I0 299 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 LRRC6Q86X45 466 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 MUC15Q8N387 334 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 ZFAND2AQ8N6M9 145 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 TRIML2Q8N7C3 387 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 OR4C16Q8NGL9 310 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 ZNF75CPQ92670 426 aaPredicted RBP1.25□□□□□ -2.21
SCAF11-215ENST00000551391 CATSPER2Q96P56 530 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 HBEGFQ99075 208 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 AICDAQ9GZX7 198 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 CXCL16Q9H2A7 254 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 XKR8Q9H6D3 395 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 TAS2R13Q9NYV9 303 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 SNX24Q9Y343 169 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 TRPM3Q9HCF6 1732 aaPredicted RBP1.25□□□□□ -2.21
SCAF11-215ENST00000551391 SLIT2O94813 1529 aa1.25□□□□□ -2.21
SCAF11-215ENST00000551391 LOC102725191A0A1B0GVB3 256 aa1.24□□□□□ -2.21
SCAF11-215ENST00000551391 ODF3BA8MYP8 253 aa1.24□□□□□ -2.21
SCAF11-215ENST00000551391 BOLA2-SMG1P6H3BVE0 249 aa1.24□□□□□ -2.21
SCAF11-215ENST00000551391 POLR3GO15318 223 aaPredicted RBP1.24□□□□□ -2.21
SCAF11-215ENST00000551391 FADS2O95864 444 aaKnown RBP1.24□□□□□ -2.21
SCAF11-215ENST00000551391 P0DMU3 169 aa1.24□□□□□ -2.21
SCAF11-215ENST00000551391 FAM231AP0DMU4 169 aa1.24□□□□□ -2.21
SCAF11-215ENST00000551391 FAM231CP0DMU5 169 aa1.24□□□□□ -2.21
SCAF11-215ENST00000551391 BLVRBP30043 206 aaPredicted RBP1.24□□□□□ -2.21
SCAF11-215ENST00000551391 UBE2KP61086 200 aa1.24□□□□□ -2.21
SCAF11-215ENST00000551391 SKP2Q13309 424 aa1.24□□□□□ -2.21
SCAF11-215ENST00000551391 FBXO48Q5FWF7 155 aa1.24□□□□□ -2.21
SCAF11-215ENST00000551391 SDIM1Q6ZPB5 146 aa1.24□□□□□ -2.21
SCAF11-215ENST00000551391 OR9I1Q8NGQ6 314 aa1.24□□□□□ -2.21
SCAF11-215ENST00000551391 OR5C1Q8NGR4 320 aa1.24□□□□□ -2.21
SCAF11-215ENST00000551391 RORBQ92753 470 aa1.24□□□□□ -2.21
SCAF11-215ENST00000551391 GALMQ96C23 342 aa1.24□□□□□ -2.21
SCAF11-215ENST00000551391 CCDC124Q96CT7 223 aaKnown RBP1.24□□□□□ -2.21
SCAF11-215ENST00000551391 DDIT4LQ96D03 193 aa1.24□□□□□ -2.21
SCAF11-215ENST00000551391 MRAP2Q96G30 205 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms