RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 PFDN5Q99471 154 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 TTTY12Q9BZ98 90 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 KCNS2Q9ULS6 477 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 KLF13Q9Y2Y9 288 aaPredicted RBP9.53□□□□□ -0.88
LINC00661-204ENST00000549354 NSG2Q9Y328 171 aa9.53□□□□□ -0.88
LINC00661-204ENST00000549354 ARGFXA6NJG6 315 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 ST8SIA3O43173 380 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 IGLV3-1P01715 115 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 DANCRP0C864 163 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 LYL1P12980 280 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 CLDN18P56856 261 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 GRB2P62993 217 aaKnown RBP9.52□□□□□ -0.89
LINC00661-204ENST00000549354 RIPPLY2Q5TAB7 128 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 FAM89BQ8N5H3 189 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 TCTEX1D2Q8WW35 142 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 HAS2Q92819 552 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 SPTSSAQ969W0 71 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 METTL9Q9H1A3 318 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 NAA60Q9H7X0 242 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 OR14J1Q9UGF5 321 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 STARD10Q9Y365 291 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 OTX1P32242 354 aaPredicted RBP9.52□□□□□ -0.89
LINC00661-204ENST00000549354 RPS23P62266 143 aaKnown RBP9.52□□□□□ -0.89
LINC00661-204ENST00000549354 GNMTQ14749 295 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 GPR157Q5UAW9 335 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 BEND4Q6ZU67 534 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 ZNF695Q8IW36 515 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 SLC35B3Q9H1N7 401 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 FZR1Q9UM11 496 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 PPP1R3CQ9UQK1 317 aa9.52□□□□□ -0.89
LINC00661-204ENST00000549354 UBE2CO00762 179 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 CTSDP07339 412 aaPredicted RBP9.51□□□□□ -0.89
LINC00661-204ENST00000549354 RBP2P50120 134 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 ELLP55199 621 aaPredicted RBP9.51□□□□□ -0.89
LINC00661-204ENST00000549354 FAM3AP98173 230 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 ZNF154Q13106 437 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 LINC00469Q8N7U9 141 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 ZNF611Q8N823 705 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 UBAC2Q8NBM4 344 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 CPT1CQ8TCG5 803 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 CHST5Q9GZS9 411 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 FAM234AQ9H0X4 552 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 PTPRBP23467 1997 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 TGIF2-C20orf24A0A0A6YYL0 155 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 CEACAM18A8MTB9 384 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 SMIM6P0DI80 62 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 MMP9P14780 707 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 AGAP20933 346 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 ATP6V0CP27449 155 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 UBE2KP61086 200 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 VAMP2P63027 116 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 TMEM187Q14656 261 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 TMPRSS7Q7RTY8 843 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 TMEM251Q8N6I4 163 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 OR56B2PQ8NGI1 322 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 OR5C1Q8NGR4 320 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 OR1J1Q8NGS3 322 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 RNF122Q9H9V4 155 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 SLC7A10Q9NS82 523 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 NECAP2Q9NVZ3 263 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 ZNF724A8MTY0 619 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 AP4M1O00189 453 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 ADAM20O43506 726 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 WDR1O75083 606 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 S100A8P05109 93 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 EIF2S3P41091 472 aaKnown RBP9.51□□□□□ -0.89
LINC00661-204ENST00000549354 LINC00205P59089 165 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 KRTAP27-1Q3LI81 207 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 CYB561D1Q8N8Q1 229 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 OR10D4PQ8NGN7 298 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 GGACTQ9BVM4 153 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 FBLN5Q9UBX5 448 aa9.51□□□□□ -0.89
LINC00661-204ENST00000549354 TNCP24821 2201 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 KLRC4-KLRK1H3BQV0 150 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 CYB5BO43169 146 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 CEACAM1P13688 526 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 PRF1P14222 555 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 RAB2AP61019 212 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 PSG4Q00888 419 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 EWSR1Q01844 656 aaKnown RBP eCLIP9.5□□□□□ -0.89
LINC00661-204ENST00000549354 IGFL2Q6UWQ7 119 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 TPRX1Q8N7U7 411 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 Q96M66 194 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 PRO1933Q9H354 126 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 CCL28Q9NRJ3 127 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 H3BQ15 152 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 LILRA1O75019 489 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 CST2P09228 141 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 CXCL1P09341 107 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 P2RY1P47900 373 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 TESK1Q15569 626 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 NRN1LQ496H8 165 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 ATP1A1-AS1Q5TC04 95 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 SPNS3Q6ZMD2 512 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 GCNT2Q8N0V5 402 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 TMEM171Q8WVE6 324 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 RAB39BQ96DA2 213 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 LINC00470Q9BZP3 86 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 TOLLIPQ9H0E2 274 aa9.5□□□□□ -0.89
LINC00661-204ENST00000549354 ZNF552Q9H707 407 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms