RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 PRRX1P54821 245 aa12.7□□□□□ -0.38
DDX54-205ENST00000548786 EMX1Q04741 257 aaPredicted RBP12.7□□□□□ -0.38
DDX54-205ENST00000548786 HABP2Q14520 560 aaPredicted RBP12.7□□□□□ -0.38
DDX54-205ENST00000548786 SSX1Q16384 188 aa12.7□□□□□ -0.38
DDX54-205ENST00000548786 HLA-DRB5Q30154 266 aa12.7□□□□□ -0.38
DDX54-205ENST00000548786 SIGIRRQ6IA17 410 aa12.7□□□□□ -0.38
DDX54-205ENST00000548786 ZNF497Q6ZNH5 498 aa12.7□□□□□ -0.38
DDX54-205ENST00000548786 SGMS2Q8NHU3 365 aa12.7□□□□□ -0.38
DDX54-205ENST00000548786 ARL11Q969Q4 196 aa12.7□□□□□ -0.38
DDX54-205ENST00000548786 MRPS24Q96EL2 167 aaKnown RBP12.7□□□□□ -0.38
DDX54-205ENST00000548786 CST11Q9H112 138 aa12.7□□□□□ -0.38
DDX54-205ENST00000548786 C16orf95Q9H693 158 aa12.7□□□□□ -0.38
DDX54-205ENST00000548786 PLGRKTQ9HBL7 147 aa12.7□□□□□ -0.38
DDX54-205ENST00000548786 SPACA1Q9HBV2 294 aa12.7□□□□□ -0.38
DDX54-205ENST00000548786 RAB18Q9NP72 206 aa12.7□□□□□ -0.38
DDX54-205ENST00000548786 TRAPPC2LQ9UL33 140 aa12.7□□□□□ -0.38
DDX54-205ENST00000548786 PSG11Q9UQ72 335 aa12.7□□□□□ -0.38
DDX54-205ENST00000548786 LEUTXA8MZ59 168 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 SDCBPO00560 298 aaPredicted RBP12.69□□□□□ -0.38
DDX54-205ENST00000548786 TSPAN9O75954 239 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 MT-ND4P03905 459 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 PSMA1P25786 263 aaKnown RBP12.69□□□□□ -0.38
DDX54-205ENST00000548786 CLDN12P56749 244 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 PROK1P58294 105 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 GABARAPL2P60520 117 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 PAX5Q02548 391 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 TRAM1Q15629 374 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 FBLN7Q53RD9 439 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 C1orf100Q5SVJ3 147 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 TPTE2P1Q5T6R2 138 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 SYT6Q5T7P8 510 aaPredicted RBP12.69□□□□□ -0.38
DDX54-205ENST00000548786 OR9G1Q8NH87 305 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 NICN1Q9BSH3 213 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 NPFFR1Q9GZQ6 430 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 MMP28Q9H239 520 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 NCOR1P1Q9H4R4 102 aa12.69□□□□□ -0.38
DDX54-205ENST00000548786 MGAM2Q2M2H8 2515 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 TRRAPQ9Y4A5 3859 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 A0A087X0M5 115 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 A0A1B0GX30 115 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 NPIPB11E5RHQ5 1161 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 J3QR06 171 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 SLC22A1O15245 554 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 DENRO43583 198 aaKnown RBP12.68□□□□□ -0.38
DDX54-205ENST00000548786 PDCD6O75340 191 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 ARL6IP5O75915 188 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 UBBP0CG47 229 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 FUT3P21217 361 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 PSMB9P28065 219 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 CEACAM3P40198 252 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 UNC119Q13432 240 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 DIAPH2-AS1Q14236 149 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 LIAT1Q6ZQX7 453 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 C5orf24Q7Z6I8 188 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 C11orf44Q8N8P7 122 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 OR6M1Q8NGM8 313 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 TOMM40LQ969M1 308 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 TMEM59Q9BXS4 323 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 GHRLQ9UBU3 117 aa12.68□□□□□ -0.38
DDX54-205ENST00000548786 VWFP04275 2813 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 C12orf77C9JDV5 145 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 C15orf65H3BRN8 121 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 RRP9O43818 475 aaKnown RBP12.67□□□□□ -0.38
DDX54-205ENST00000548786 RCC1P18754 421 aaPredicted RBP12.67□□□□□ -0.38
DDX54-205ENST00000548786 GZMHP20718 246 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 RPS27AP62979 156 aaKnown RBP12.67□□□□□ -0.38
DDX54-205ENST00000548786 RAB11BQ15907 218 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 ARSJQ5FYB0 599 aaPredicted RBP12.67□□□□□ -0.38
DDX54-205ENST00000548786 C6orf201Q7Z4U5 140 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 SVOPQ8N4V2 548 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 OR10V1Q8NGI7 309 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 OR10X1Q8NGY0 326 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 OR1L1Q8NH94 360 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 OR2T6Q8NHC8 308 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 RPEQ96AT9 228 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 NEDD4LQ96PU5 975 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 CITED1Q99966 193 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 SULT4A1Q9BR01 284 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 LINC00574Q9H8X3 128 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 PITPNC1Q9UKF7 332 aa12.67□□□□□ -0.38
DDX54-205ENST00000548786 AMMECR1Q9Y4X0 333 aaPredicted RBP12.67□□□□□ -0.38
DDX54-205ENST00000548786 A0A0A6YYD4 124 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 FAM90A10PA6NDY2 464 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 FAM90A18PA6NE21 464 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 FAM90A16PA6NEW6 464 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 FAM90A20PA6NIJ5 464 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 FAM90A7PA6NKC0 464 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 FAM90A22PA8MWA6 464 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 FAM90A12PA8MX19 464 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 FAM90A5PA8MXJ8 464 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 FAM90A23PA8MXZ1 464 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 LY6LH3BQJ8 138 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 BPNT1O95861 308 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 FAM90A15PP0C7V4 464 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 FAM90A13PP0C7W8 464 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 FAM90A14PP0C7W9 464 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 FAM90A24PP0C7X0 464 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 VSIG10L2P0DP72 767 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 ARSBP15848 533 aa12.66□□□□□ -0.38
DDX54-205ENST00000548786 REG1BP48304 166 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms