RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 OR4M2Q8NGB6 313 aa4.1□□□□□ -1.75
APP-217ENST00000548570 OR8B3Q8NGG8 313 aa4.1□□□□□ -1.75
APP-217ENST00000548570 OR56B1Q8NGI3 324 aa4.1□□□□□ -1.75
APP-217ENST00000548570 OR4K15Q8NH41 348 aa4.1□□□□□ -1.75
APP-217ENST00000548570 MCFD2Q8NI22 146 aa4.1□□□□□ -1.75
APP-217ENST00000548570 UBALD1Q8TB05 177 aa4.1□□□□□ -1.75
APP-217ENST00000548570 MRGPRDQ8TDS7 321 aa4.1□□□□□ -1.75
APP-217ENST00000548570 NUDCD2Q8WVJ2 157 aa4.1□□□□□ -1.75
APP-217ENST00000548570 RAB40AQ8WXH6 277 aa4.1□□□□□ -1.75
APP-217ENST00000548570 MAFIPQ8WZ33 124 aa4.1□□□□□ -1.75
APP-217ENST00000548570 SNAPC3Q92966 411 aa4.1□□□□□ -1.75
APP-217ENST00000548570 RAB3CQ96E17 227 aa4.1□□□□□ -1.75
APP-217ENST00000548570 AJUBAQ96IF1 538 aa4.1□□□□□ -1.75
APP-217ENST00000548570 CLUHP3Q96NS8 147 aa4.1□□□□□ -1.75
APP-217ENST00000548570 OR8B2Q96RD0 313 aa4.1□□□□□ -1.75
APP-217ENST00000548570 TBX15Q96SF7 602 aa4.1□□□□□ -1.75
APP-217ENST00000548570 S100A13Q99584 98 aa4.1□□□□□ -1.75
APP-217ENST00000548570 URM1Q9BTM9 101 aaKnown RBP4.1□□□□□ -1.75
APP-217ENST00000548570 TMPRSS13Q9BYE2 586 aa4.1□□□□□ -1.75
APP-217ENST00000548570 PARP12Q9H0J9 701 aaKnown RBP4.1□□□□□ -1.75
APP-217ENST00000548570 MMP27Q9H306 513 aa4.1□□□□□ -1.75
APP-217ENST00000548570 LINC00574Q9H8X3 128 aa4.1□□□□□ -1.75
APP-217ENST00000548570 PCDHB16Q9NRJ7 776 aa4.1□□□□□ -1.75
APP-217ENST00000548570 MBNL3Q9NUK0 354 aaKnown RBP4.1□□□□□ -1.75
APP-217ENST00000548570 ETAA1Q9NY74 926 aa4.1□□□□□ -1.75
APP-217ENST00000548570 CLN8Q9UBY8 286 aa4.1□□□□□ -1.75
APP-217ENST00000548570 ZNF230Q9UIE0 474 aaPredicted RBP4.1□□□□□ -1.75
APP-217ENST00000548570 ANAPC10Q9UM13 185 aa4.1□□□□□ -1.75
APP-217ENST00000548570 INSIG2Q9Y5U4 225 aa4.1□□□□□ -1.75
APP-217ENST00000548570 SOX21Q9Y651 276 aaPredicted RBP4.1□□□□□ -1.75
APP-217ENST00000548570 MAP1AP78559 2803 aaPredicted RBP4.1□□□□□ -1.75
APP-217ENST00000548570 ZANQ9Y493 2812 aa4.1□□□□□ -1.75
APP-217ENST00000548570 CACNA1DQ01668 2161 aa4.1□□□□□ -1.75
APP-217ENST00000548570 ARFGEF3Q5TH69 2177 aa4.1□□□□□ -1.75
APP-217ENST00000548570 MEIKINA0A087WXM9 373 aa4.09□□□□□ -1.75
APP-217ENST00000548570 TRBV6-6A0A0A6YYG2 114 aa4.09□□□□□ -1.75
APP-217ENST00000548570 A0A0A6YYH2 397 aa4.09□□□□□ -1.75
APP-217ENST00000548570 MEIS3P1A6NDR6 274 aa4.09□□□□□ -1.75
APP-217ENST00000548570 NKX6-3A6NJ46 265 aa4.09□□□□□ -1.75
APP-217ENST00000548570 A6NJ64 397 aa4.09□□□□□ -1.75
APP-217ENST00000548570 MCRIP1C9JLW8 97 aa4.09□□□□□ -1.75
APP-217ENST00000548570 EREGO14944 169 aa4.09□□□□□ -1.75
APP-217ENST00000548570 NOL3O60936 208 aaKnown RBP4.09□□□□□ -1.75
APP-217ENST00000548570 CA11O75493 328 aa4.09□□□□□ -1.75
APP-217ENST00000548570 CLPXO76031 633 aa4.09□□□□□ -1.75
APP-217ENST00000548570 LY6G6DO95868 133 aa4.09□□□□□ -1.75
APP-217ENST00000548570 TGFAP01135 160 aa4.09□□□□□ -1.75
APP-217ENST00000548570 FCER2P06734 321 aa4.09□□□□□ -1.75
APP-217ENST00000548570 MSMBP08118 114 aa4.09□□□□□ -1.75
APP-217ENST00000548570 FCGR3AP08637 254 aa4.09□□□□□ -1.75
APP-217ENST00000548570 CD3GP09693 182 aa4.09□□□□□ -1.75
APP-217ENST00000548570 EPHA1P21709 976 aa4.09□□□□□ -1.75
APP-217ENST00000548570 OMGP23515 440 aa4.09□□□□□ -1.75
APP-217ENST00000548570 SSTR5P35346 364 aa4.09□□□□□ -1.75
APP-217ENST00000548570 ETV6P41212 452 aa4.09□□□□□ -1.75
APP-217ENST00000548570 KCNJ3P48549 501 aa4.09□□□□□ -1.75
APP-217ENST00000548570 NPY4RP50391 375 aa4.09□□□□□ -1.75
APP-217ENST00000548570 DVL1P1P54792 670 aaPredicted RBP4.09□□□□□ -1.75
APP-217ENST00000548570 EDDM3BP56851 147 aa4.09□□□□□ -1.75
APP-217ENST00000548570 LOXL3P58215 753 aa4.09□□□□□ -1.75
APP-217ENST00000548570 ARF6P62330 175 aa4.09□□□□□ -1.75
APP-217ENST00000548570 RPL31P62899 125 aaKnown RBP4.09□□□□□ -1.75
APP-217ENST00000548570 HMGN3Q15651 99 aa4.09□□□□□ -1.75
APP-217ENST00000548570 ESCO2Q56NI9 601 aa4.09□□□□□ -1.75
APP-217ENST00000548570 LRRC10Q5BKY1 277 aa4.09□□□□□ -1.75
APP-217ENST00000548570 KLF17Q5JT82 389 aaPredicted RBP4.09□□□□□ -1.75
APP-217ENST00000548570 KRBOX4Q5JUW0 171 aa4.09□□□□□ -1.75
APP-217ENST00000548570 C16orf54Q6UWD8 224 aa4.09□□□□□ -1.75
APP-217ENST00000548570 NLRC3Q7RTR2 1065 aa4.09□□□□□ -1.75
APP-217ENST00000548570 LYSMD2Q8IV50 215 aa4.09□□□□□ -1.75
APP-217ENST00000548570 LINC01356Q8N9X3 169 aa4.09□□□□□ -1.75
APP-217ENST00000548570 OR1L1Q8NH94 360 aa4.09□□□□□ -1.75
APP-217ENST00000548570 GPX8Q8TED1 209 aa4.09□□□□□ -1.75
APP-217ENST00000548570 CCDC107Q8WV48 283 aa4.09□□□□□ -1.75
APP-217ENST00000548570 AP3S1Q92572 193 aa4.09□□□□□ -1.75
APP-217ENST00000548570 TMEM186Q96B77 213 aa4.09□□□□□ -1.75
APP-217ENST00000548570 RBMXL1Q96E39 390 aaKnown RBP4.09□□□□□ -1.75
APP-217ENST00000548570 C18orf12Q96KH6 178 aa4.09□□□□□ -1.75
APP-217ENST00000548570 SRRQ9GZT4 340 aa4.09□□□□□ -1.75
APP-217ENST00000548570 C6orf62Q9GZU0 229 aaPredicted RBP4.09□□□□□ -1.75
APP-217ENST00000548570 NCOR1P1Q9H4R4 102 aa4.09□□□□□ -1.75
APP-217ENST00000548570 SPACA1Q9HBV2 294 aa4.09□□□□□ -1.75
APP-217ENST00000548570 Q9N2K0 584 aa4.09□□□□□ -1.75
APP-217ENST00000548570 AKIP1Q9NQ31 210 aa4.09□□□□□ -1.75
APP-217ENST00000548570 PLEKHJ1Q9NW61 149 aa4.09□□□□□ -1.75
APP-217ENST00000548570 HIF1ANQ9NWT6 349 aa4.09□□□□□ -1.75
APP-217ENST00000548570 PTTG2Q9NZH5 202 aa4.09□□□□□ -1.75
APP-217ENST00000548570 ZNRD1Q9P1U0 126 aa4.09□□□□□ -1.75
APP-217ENST00000548570 EXTL2Q9UBQ6 330 aa4.09□□□□□ -1.75
APP-217ENST00000548570 PCDHB10Q9UN67 800 aa4.09□□□□□ -1.75
APP-217ENST00000548570 PRRC2AP48634 2157 aaKnown RBP4.09□□□□□ -1.76
APP-217ENST00000548570 NOTCH2Q04721 2471 aa4.09□□□□□ -1.76
APP-217ENST00000548570 HIVEP1P15822 2718 aa4.08□□□□□ -1.76
APP-217ENST00000548570 KBTBD11-OT1A0A1B0GTJ5 212 aa4.08□□□□□ -1.76
APP-217ENST00000548570 TMEM30CPA0ZSE6 113 aa4.08□□□□□ -1.76
APP-217ENST00000548570 METTL21EPA6NDL7 271 aa4.08□□□□□ -1.76
APP-217ENST00000548570 SERPINE3A8MV23 424 aa4.08□□□□□ -1.76
APP-217ENST00000548570 B4DSR2 109 aa4.08□□□□□ -1.76
APP-217ENST00000548570 RNASEK-C17orf49H0YIS7 233 aa4.08□□□□□ -1.76
APP-217ENST00000548570 F2RL2O00254 374 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms