RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 TGFBR1P36897 503 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 OR3A4PP47883 348 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 THBS3P49746 956 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 RPL23AP62750 156 aaKnown RBP13.04□□□□□ -0.32
SSH1-208ENST00000548522 RPS25P62851 125 aaKnown RBP13.04□□□□□ -0.32
SSH1-208ENST00000548522 ZNF85Q03923 595 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 AESQ08117 197 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 RBM39Q14498 530 aaKnown RBP13.04□□□□□ -0.32
SSH1-208ENST00000548522 ZNF146Q15072 292 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 HLA-DRB5Q30154 266 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 HEPN1Q6WQI6 88 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 OR2W3Q7Z3T1 314 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 KCTD20Q7Z5Y7 419 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 RDH10Q8IZV5 341 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 OR10H4Q8NGA5 316 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 ZNF596Q8TC21 504 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 RFT1Q96AA3 541 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 ADAT3Q96EY9 351 aaPredicted RBP13.04□□□□□ -0.32
SSH1-208ENST00000548522 DUX3Q96PT4 197 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 ING3Q9NXR8 418 aa13.04□□□□□ -0.32
SSH1-208ENST00000548522 TRGV10A0A0A0MS01 117 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 IGKV1-12A0A0C4DH73 117 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 A0A1W2PQL4 384 aaPredicted RBP13.03□□□□□ -0.32
SSH1-208ENST00000548522 LY6LH3BQJ8 138 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 BUB1B-PAK6H3BSN5 160 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 H3BUI4 141 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 OGG1O15527 345 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 OR2H2O95918 312 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 LALBAP00709 142 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 SERPINA3P01011 423 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 IGKV1D-12P01611 117 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 KRT8P05787 483 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 ERP29P30040 261 aaKnown RBP13.03□□□□□ -0.32
SSH1-208ENST00000548522 RPS19P39019 145 aaKnown RBP13.03□□□□□ -0.32
SSH1-208ENST00000548522 KIR3DL2P43630 455 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 MTNR1BP49286 362 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 SPANXN2Q5MJ10 180 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 DPF1Q92782 380 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 C6orf62Q9GZU0 229 aaPredicted RBP13.03□□□□□ -0.32
SSH1-208ENST00000548522 GAL3ST2Q9H3Q3 398 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 RNF167Q9H6Y7 350 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 SEBOXQ9HB31 216 aaPredicted RBP13.03□□□□□ -0.32
SSH1-208ENST00000548522 LINC00527Q9UJ94 153 aa13.03□□□□□ -0.32
SSH1-208ENST00000548522 GABRPO00591 440 aa13.02□□□□□ -0.33
SSH1-208ENST00000548522 UPK1BO75841 260 aa13.02□□□□□ -0.33
SSH1-208ENST00000548522 SC5DO75845 299 aa13.02□□□□□ -0.33
SSH1-208ENST00000548522 CELP19835 753 aa13.02□□□□□ -0.33
SSH1-208ENST00000548522 PTBP1P26599 531 aaKnown RBP eCLIP13.02□□□□□ -0.33
SSH1-208ENST00000548522 CD34P28906 385 aa13.02□□□□□ -0.33
SSH1-208ENST00000548522 FABP5Q01469 135 aa13.02□□□□□ -0.33
SSH1-208ENST00000548522 SPIN3Q5JUX0 258 aa13.02□□□□□ -0.33
SSH1-208ENST00000548522 DMKNQ6E0U4 476 aaPredicted RBP13.02□□□□□ -0.33
SSH1-208ENST00000548522 RTN4RL2Q86UN3 420 aa13.02□□□□□ -0.33
SSH1-208ENST00000548522 TPRA1Q86W33 373 aa13.02□□□□□ -0.33
SSH1-208ENST00000548522 Q8IYB0 196 aa13.02□□□□□ -0.33
SSH1-208ENST00000548522 ACOT12Q8WYK0 555 aa13.02□□□□□ -0.33
SSH1-208ENST00000548522 RNF166Q96A37 237 aaPredicted RBP13.02□□□□□ -0.33
SSH1-208ENST00000548522 KCTD12Q96CX2 325 aaKnown RBP13.02□□□□□ -0.33
SSH1-208ENST00000548522 COQ2Q96H96 371 aa13.02□□□□□ -0.33
SSH1-208ENST00000548522 MOB4Q9Y3A3 225 aa13.02□□□□□ -0.33
SSH1-208ENST00000548522 EPPK1P58107 5090 aaKnown RBP13.02□□□□□ -0.33
SSH1-208ENST00000548522 ODAMA1E959 279 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 J3QRK9 145 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 CDRT1O95170 752 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 IGHV3-7P01780 117 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 SNRNP70P08621 437 aaKnown RBP13.01□□□□□ -0.33
SSH1-208ENST00000548522 PTGFRP43088 359 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 RBP2P50120 134 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 ARHGDIBP52566 201 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 GBX2P52951 348 aaPredicted RBP13.01□□□□□ -0.33
SSH1-208ENST00000548522 MTCP1P56278 107 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 OXA1LQ15070 435 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 C17orf58Q2M2W7 97 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 C22orf42Q6IC83 251 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 OR52W1Q6IF63 320 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 RPL22L1Q6P5R6 122 aaKnown RBP13.01□□□□□ -0.33
SSH1-208ENST00000548522 OR51D1Q8NGF3 324 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 OR5D18Q8NGL1 313 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 OR56B4Q8NH76 319 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 SPACA5Q96QH8 159 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 P2RX4Q99571 388 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 BARHL1Q9BZE3 327 aa13.01□□□□□ -0.33
SSH1-208ENST00000548522 PPIL3Q9H2H8 161 aaKnown RBP13.01□□□□□ -0.33
SSH1-208ENST00000548522 NUDT19A8MXV4 375 aa13□□□□□ -0.33
SSH1-208ENST00000548522 ATP1B3P54709 279 aa13□□□□□ -0.33
SSH1-208ENST00000548522 DIAPH2-AS1Q14236 149 aa13□□□□□ -0.33
SSH1-208ENST00000548522 ATXN7L3Q14CW9 347 aaPredicted RBP13□□□□□ -0.33
SSH1-208ENST00000548522 NKAPLQ5M9Q1 402 aa13□□□□□ -0.33
SSH1-208ENST00000548522 KLHL30-AS1Q8NEE0 82 aa13□□□□□ -0.33
SSH1-208ENST00000548522 CORO2AQ92828 525 aa13□□□□□ -0.33
SSH1-208ENST00000548522 LEAP2Q969E1 77 aa13□□□□□ -0.33
SSH1-208ENST00000548522 SMIM19Q96E16 107 aa13□□□□□ -0.33
SSH1-208ENST00000548522 C4orf36Q96KX1 117 aa13□□□□□ -0.33
SSH1-208ENST00000548522 PGLYRP3Q96LB9 341 aa13□□□□□ -0.33
SSH1-208ENST00000548522 GPR61Q9BZJ8 451 aa13□□□□□ -0.33
SSH1-208ENST00000548522 ISG20L2Q9H9L3 353 aaKnown RBP13□□□□□ -0.33
SSH1-208ENST00000548522 TAS2R3Q9NYW6 316 aa13□□□□□ -0.33
SSH1-208ENST00000548522 A0A087X0M5 115 aa12.99□□□□□ -0.33
SSH1-208ENST00000548522 A0A1B0GVG6 124 aa12.99□□□□□ -0.33
SSH1-208ENST00000548522 A0A1B0GX30 115 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms