RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 GZMHP20718 246 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 NFYBP25208 207 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 GABRA5P31644 462 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 KIR2DS4P43632 304 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 C1orf100Q5SVJ3 147 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 ZNF497Q6ZNH5 498 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 SLC16A12Q6ZSM3 486 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 ZNF367Q7RTV3 350 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 TMEM104Q8NE00 496 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 SELENOIQ9C0D9 397 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 MMP28Q9H239 520 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 BANF2Q9H503 90 aa12.81□□□□□ -0.36
DDX54-204ENST00000546898 AMMECR1Q9Y4X0 333 aaPredicted RBP12.81□□□□□ -0.36
DDX54-204ENST00000546898 OOSP1A8MZH6 123 aa12.8□□□□□ -0.36
DDX54-204ENST00000546898 BUB1B-PAK6H3BSN5 160 aa12.8□□□□□ -0.36
DDX54-204ENST00000546898 CD37P11049 281 aa12.8□□□□□ -0.36
DDX54-204ENST00000546898 BRS3P32247 399 aa12.8□□□□□ -0.36
DDX54-204ENST00000546898 SSTR5P35346 364 aa12.8□□□□□ -0.36
DDX54-204ENST00000546898 MAP2K4P45985 399 aa12.8□□□□□ -0.36
DDX54-204ENST00000546898 RAB13P51153 203 aa12.8□□□□□ -0.36
DDX54-204ENST00000546898 RPS25P62851 125 aaKnown RBP12.8□□□□□ -0.36
DDX54-204ENST00000546898 RAB12Q6IQ22 244 aa12.8□□□□□ -0.36
DDX54-204ENST00000546898 TMEM91Q6ZNR0 172 aa12.8□□□□□ -0.36
DDX54-204ENST00000546898 GAPTQ8N292 157 aa12.8□□□□□ -0.36
DDX54-204ENST00000546898 OR2T6Q8NHC8 308 aa12.8□□□□□ -0.36
DDX54-204ENST00000546898 TMEM203Q969S6 136 aa12.8□□□□□ -0.36
DDX54-204ENST00000546898 RAB9BQ9NP90 201 aa12.8□□□□□ -0.36
DDX54-204ENST00000546898 ETAA1Q9NY74 926 aa12.8□□□□□ -0.36
DDX54-204ENST00000546898 TRRAPQ9Y4A5 3859 aa12.79□□□□□ -0.36
DDX54-204ENST00000546898 J3QR06 171 aa12.79□□□□□ -0.36
DDX54-204ENST00000546898 AIPO00170 330 aa12.79□□□□□ -0.36
DDX54-204ENST00000546898 ORC5O43913 435 aa12.79□□□□□ -0.36
DDX54-204ENST00000546898 FUT3P21217 361 aa12.79□□□□□ -0.36
DDX54-204ENST00000546898 HTR2CP28335 458 aa12.79□□□□□ -0.36
DDX54-204ENST00000546898 TPTE2P1Q5T6R2 138 aa12.79□□□□□ -0.36
DDX54-204ENST00000546898 CCDC144NLQ6NUI1 221 aa12.79□□□□□ -0.36
DDX54-204ENST00000546898 C16orf82Q7Z2V1 217 aa12.79□□□□□ -0.36
DDX54-204ENST00000546898 OR52M1Q8NGK5 317 aa12.79□□□□□ -0.36
DDX54-204ENST00000546898 OR6M1Q8NGM8 313 aa12.79□□□□□ -0.36
DDX54-204ENST00000546898 ACOT13Q9NPJ3 140 aa12.79□□□□□ -0.36
DDX54-204ENST00000546898 PEX16Q9Y5Y5 336 aa12.79□□□□□ -0.36
DDX54-204ENST00000546898 LY6LH3BQJ8 138 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 TIMM23O14925 209 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 SLC22A1O15245 554 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 DENRO43583 198 aaKnown RBP12.78□□□□□ -0.36
DDX54-204ENST00000546898 PDCD6O75340 191 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 BPNT1O95861 308 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 MPIG6BO95866 241 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 MT-ND4P03905 459 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 VSIG8P0DPA2 414 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 MNDAP41218 407 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 RANBP1P43487 201 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 EFNB2P52799 333 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 TMEM30BQ3MIR4 351 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 C6orf183Q5T699 404 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 TRAT1Q6PIZ9 186 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 CCBE1Q6UXH8 406 aaPredicted RBP12.78□□□□□ -0.36
DDX54-204ENST00000546898 SVOPQ8N4V2 548 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 RFESDQ8TAC1 157 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 KCNG3Q8TAE7 436 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 ARL11Q969Q4 196 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 FAM46BQ96A09 425 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 TMEM59Q9BXS4 323 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 PSG11Q9UQ72 335 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 PKD1L1Q8TDX9 2849 aa12.78□□□□□ -0.36
DDX54-204ENST00000546898 TET2Q6N021 2002 aaPredicted RBP12.78□□□□□ -0.36
DDX54-204ENST00000546898 TRAV39A0A0B4J263 110 aa12.77□□□□□ -0.37
DDX54-204ENST00000546898 C15orf65H3BRN8 121 aa12.77□□□□□ -0.37
DDX54-204ENST00000546898 JUNBP17275 347 aaPredicted RBP12.77□□□□□ -0.37
DDX54-204ENST00000546898 KRTAP10-3P60369 221 aa12.77□□□□□ -0.37
DDX54-204ENST00000546898 RPS27AP62979 156 aaKnown RBP12.77□□□□□ -0.37
DDX54-204ENST00000546898 FABP5Q01469 135 aa12.77□□□□□ -0.37
DDX54-204ENST00000546898 SRSF4Q08170 494 aaKnown RBP12.77□□□□□ -0.37
DDX54-204ENST00000546898 LTC4SQ16873 150 aa12.77□□□□□ -0.37
DDX54-204ENST00000546898 Q3ZCU0 254 aa12.77□□□□□ -0.37
DDX54-204ENST00000546898 SIGIRRQ6IA17 410 aa12.77□□□□□ -0.37
DDX54-204ENST00000546898 TMEM219Q86XT9 240 aa12.77□□□□□ -0.37
DDX54-204ENST00000546898 CCDC107Q8WV48 283 aa12.77□□□□□ -0.37
DDX54-204ENST00000546898 TOMM40LQ969M1 308 aa12.77□□□□□ -0.37
DDX54-204ENST00000546898 AKR1E2Q96JD6 320 aa12.77□□□□□ -0.37
DDX54-204ENST00000546898 TM2D1Q9BX74 207 aa12.77□□□□□ -0.37
DDX54-204ENST00000546898 YTHDF1Q9BYJ9 559 aaKnown RBP12.77□□□□□ -0.37
DDX54-204ENST00000546898 WNK1Q9H4A3 2382 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 TMEM14DPA8MWL7 114 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 SLC17A2O00624 439 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 CALRP27797 417 aaKnown RBP12.76□□□□□ -0.37
DDX54-204ENST00000546898 EMX1Q04741 257 aaPredicted RBP12.76□□□□□ -0.37
DDX54-204ENST00000546898 MADCAM1Q13477 382 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 UTF1Q5T230 341 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 SYT6Q5T7P8 510 aaPredicted RBP12.76□□□□□ -0.37
DDX54-204ENST00000546898 ZNF554Q86TJ5 538 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 Q8N2B8 174 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 C8orf31Q8N9H6 132 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 RPEQ96AT9 228 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 NEDD4LQ96PU5 975 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 PRSS22Q9GZN4 317 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 ZNF702PQ9H963 129 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 LIN7BQ9HAP6 207 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 PLGRKTQ9HBL7 147 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 NDUFB11Q9NX14 153 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms