RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 RAB6AP20340 208 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 TGFBR1P36897 503 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 EFNB2P52799 333 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 TUSC1Q2TAM9 212 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 KRTAP21-3Q3LHN1 58 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 C6orf183Q5T699 404 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 Q6YL49 198 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 Q6ZTK2 550 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 GPR141Q7Z602 305 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 ABHD12Q8N2K0 398 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 OR11H6Q8NGC7 330 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 ARL11Q969Q4 196 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 DUX5Q96PT3 197 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 TNFRSF19Q9NS68 423 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 KCNIP1Q9NZI2 227 aa13.7□□□□□ -0.22
LTBR-215ENST00000546296 DNAJC9-AS1A6NH13 148 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 HOXA3O43365 443 aaPredicted RBP13.69□□□□□ -0.22
LTBR-215ENST00000546296 SNRPBP14678 240 aaKnown RBP13.69□□□□□ -0.22
LTBR-215ENST00000546296 SSTR5P35346 364 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 GDNFP39905 211 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 GPR107Q5VW38 600 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 BAIAP2L2Q6UXY1 529 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 RTN4RL2Q86UN3 420 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 CROCCP3Q8IVE0 287 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 ZDHHC22Q8N966 263 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 TMEM158Q8WZ71 300 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 PTX4Q96A99 478 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 ARHGAP5-AS1Q96IT6 56 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 CYYR1Q96J86 154 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 ATG5Q9H1Y0 275 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 PRDM13Q9H4Q3 707 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 RAB9BQ9NP90 201 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 ESM1Q9NQ30 184 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 HSF4Q9ULV5 492 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 CUBNO60494 3623 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 ATRQ13535 2644 aa13.69□□□□□ -0.22
LTBR-215ENST00000546296 RNF212BA8MTL3 300 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 SPINT2O43291 252 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 ORC5O43913 435 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 TFAP2AP05549 437 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 MELTFP08582 738 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 RPS19P39019 145 aaKnown RBP13.68□□□□□ -0.22
LTBR-215ENST00000546296 ALDH3B2P48448 385 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 SERPINB10P48595 397 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 PRRX1P54821 245 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 SLC9A3R2Q15599 337 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 ZNF626Q68DY1 528 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 TRAT1Q6PIZ9 186 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 GAPTQ8N292 157 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 PRR18Q8N4B5 295 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 OR10A7Q8NGE5 316 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 UBALD1Q8TB05 177 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 NDNFQ8TB73 568 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 SETD6Q8TBK2 473 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 MRPL30Q8TCC3 161 aaKnown RBP13.68□□□□□ -0.22
LTBR-215ENST00000546296 C17orf50Q8WW18 174 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 RAB3CQ96E17 227 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 KIRREL1Q96J84 757 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 PECRQ9BY49 303 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 LINC00574Q9H8X3 128 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 AK3Q9UIJ7 227 aa13.68□□□□□ -0.22
LTBR-215ENST00000546296 TBL2Q9Y4P3 447 aaKnown RBP13.68□□□□□ -0.22
LTBR-215ENST00000546296 ODF3BA8MYP8 253 aa13.67□□□□□ -0.22
LTBR-215ENST00000546296 NPIPB11E5RHQ5 1161 aa13.67□□□□□ -0.22
LTBR-215ENST00000546296 RCC1P18754 421 aaPredicted RBP13.67□□□□□ -0.22
LTBR-215ENST00000546296 TMEM50BP56557 158 aa13.67□□□□□ -0.22
LTBR-215ENST00000546296 VBP1P61758 197 aa13.67□□□□□ -0.22
LTBR-215ENST00000546296 NCS1P62166 190 aa13.67□□□□□ -0.22
LTBR-215ENST00000546296 UBA52P62987 128 aaKnown RBP13.67□□□□□ -0.22
LTBR-215ENST00000546296 MRPS15P82914 257 aaKnown RBP13.67□□□□□ -0.22
LTBR-215ENST00000546296 LHFPL4Q7Z7J7 247 aa13.67□□□□□ -0.22
LTBR-215ENST00000546296 ANKRD13BQ86YJ7 626 aa13.67□□□□□ -0.22
LTBR-215ENST00000546296 OR10R2Q8NGX6 335 aa13.67□□□□□ -0.22
LTBR-215ENST00000546296 ZNF596Q8TC21 504 aa13.67□□□□□ -0.22
LTBR-215ENST00000546296 LGALS14Q8TCE9 139 aa13.67□□□□□ -0.22
LTBR-215ENST00000546296 SSMEM1Q8WWF3 244 aa13.67□□□□□ -0.22
LTBR-215ENST00000546296 DPAGT1Q9H3H5 408 aa13.67□□□□□ -0.22
LTBR-215ENST00000546296 RIMS4Q9H426 269 aaPredicted RBP13.67□□□□□ -0.22
LTBR-215ENST00000546296 ZMAT3Q9HA38 289 aaKnown RBP13.67□□□□□ -0.22
LTBR-215ENST00000546296 ZNF286AQ9HBT8 521 aa13.67□□□□□ -0.22
LTBR-215ENST00000546296 A0A075B6Q4 140 aa13.66□□□□□ -0.22
LTBR-215ENST00000546296 BTBD17A6NE02 478 aa13.66□□□□□ -0.22
LTBR-215ENST00000546296 FOXI3A8MTJ6 420 aaPredicted RBP13.66□□□□□ -0.22
LTBR-215ENST00000546296 C12orf77C9JDV5 145 aa13.66□□□□□ -0.22
LTBR-215ENST00000546296 C15orf65H3BRN8 121 aa13.66□□□□□ -0.22
LTBR-215ENST00000546296 SDCBPO00560 298 aaPredicted RBP13.66□□□□□ -0.22
LTBR-215ENST00000546296 IGHV3-7P01780 117 aa13.66□□□□□ -0.22
LTBR-215ENST00000546296 HTR1DP28221 377 aa13.66□□□□□ -0.22
LTBR-215ENST00000546296 MOGAT2Q3SYC2 334 aa13.66□□□□□ -0.22
LTBR-215ENST00000546296 PLAC9Q5JTB6 97 aa13.66□□□□□ -0.22
LTBR-215ENST00000546296 LDLRAD3Q86YD5 345 aa13.66□□□□□ -0.22
LTBR-215ENST00000546296 BEND2Q8NDZ0 799 aa13.66□□□□□ -0.22
LTBR-215ENST00000546296 ZFAND2BQ8WV99 257 aa13.66□□□□□ -0.22
LTBR-215ENST00000546296 LEAP2Q969E1 77 aa13.66□□□□□ -0.22
LTBR-215ENST00000546296 MALSU1Q96EH3 234 aa13.66□□□□□ -0.22
LTBR-215ENST00000546296 NAA50Q9GZZ1 169 aaKnown RBP13.66□□□□□ -0.22
LTBR-215ENST00000546296 TAF9BQ9HBM6 251 aa13.66□□□□□ -0.22
LTBR-215ENST00000546296 FBN1P35555 2871 aaKnown RBP13.66□□□□□ -0.22
LTBR-215ENST00000546296 TMEM127O75204 238 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 IGHV4-59P01825 116 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms