RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 RPS11P62280 158 aaKnown RBP eCLIP18.08■□□□□ 0.49
CHD4-214ENST00000545942 GPR176Q14439 515 aa18.08■□□□□ 0.49
CHD4-214ENST00000545942 SLC22A6Q4U2R8 563 aa18.08■□□□□ 0.49
CHD4-214ENST00000545942 ATAD3CQ5T2N8 411 aa18.08■□□□□ 0.49
CHD4-214ENST00000545942 OR8H3Q8N146 312 aa18.08■□□□□ 0.49
CHD4-214ENST00000545942 DRAM1Q8N682 238 aa18.08■□□□□ 0.49
CHD4-214ENST00000545942 ZFP41Q8N8Y5 198 aa18.08■□□□□ 0.49
CHD4-214ENST00000545942 MYDGFQ969H8 173 aa18.08■□□□□ 0.49
CHD4-214ENST00000545942 TRAV8-7A0A075B6U6 113 aa18.07■□□□□ 0.48
CHD4-214ENST00000545942 A0A1W2PP11 408 aa18.07■□□□□ 0.48
CHD4-214ENST00000545942 MAGEA13PA6NCF6 341 aa18.07■□□□□ 0.48
CHD4-214ENST00000545942 EFCAB10A6NFE3 127 aa18.07■□□□□ 0.48
CHD4-214ENST00000545942 DIAPH2-AS1Q14236 149 aa18.07■□□□□ 0.48
CHD4-214ENST00000545942 HES1Q14469 280 aa18.07■□□□□ 0.48
CHD4-214ENST00000545942 NEK7Q8TDX7 302 aa18.07■□□□□ 0.48
CHD4-214ENST00000545942 CNOT2Q9NZN8 540 aaKnown RBP18.07■□□□□ 0.48
CHD4-214ENST00000545942 TMEM11P17152 192 aa18.06■□□□□ 0.48
CHD4-214ENST00000545942 CD33P20138 364 aa18.06■□□□□ 0.48
CHD4-214ENST00000545942 RCN1Q15293 331 aa18.06■□□□□ 0.48
CHD4-214ENST00000545942 C8orf59Q8N0T1 100 aaPredicted RBP18.06■□□□□ 0.48
CHD4-214ENST00000545942 WFDC9Q8NEX5 89 aa18.06■□□□□ 0.48
CHD4-214ENST00000545942 OR52M1Q8NGK5 317 aa18.06■□□□□ 0.48
CHD4-214ENST00000545942 SGCDQ92629 289 aa18.06■□□□□ 0.48
CHD4-214ENST00000545942 ARL11Q969Q4 196 aa18.06■□□□□ 0.48
CHD4-214ENST00000545942 OR14A2Q96R54 314 aa18.06■□□□□ 0.48
CHD4-214ENST00000545942 SPACA1Q9HBV2 294 aa18.06■□□□□ 0.48
CHD4-214ENST00000545942 MRPS28Q9Y2Q9 187 aaKnown RBP18.06■□□□□ 0.48
CHD4-214ENST00000545942 TRBV5-7A0A0A0MS05 114 aa18.05■□□□□ 0.48
CHD4-214ENST00000545942 A0A1W2PPE3 182 aa18.05■□□□□ 0.48
CHD4-214ENST00000545942 C15orf65H3BRN8 121 aa18.05■□□□□ 0.48
CHD4-214ENST00000545942 HSD17B6O14756 317 aa18.05■□□□□ 0.48
CHD4-214ENST00000545942 C10orf99Q6UWK7 81 aa18.05■□□□□ 0.48
CHD4-214ENST00000545942 STX19Q8N4C7 294 aa18.05■□□□□ 0.48
CHD4-214ENST00000545942 JAGN1Q8N5M9 183 aa18.05■□□□□ 0.48
CHD4-214ENST00000545942 MUL1Q969V5 352 aa18.05■□□□□ 0.48
CHD4-214ENST00000545942 PHF21AQ96BD5 680 aa18.05■□□□□ 0.48
CHD4-214ENST00000545942 MRPS24Q96EL2 167 aaKnown RBP18.05■□□□□ 0.48
CHD4-214ENST00000545942 NECAP2Q9NVZ3 263 aa18.05■□□□□ 0.48
CHD4-214ENST00000545942 PNMA8CA0A1B0GUJ8 204 aa18.04■□□□□ 0.48
CHD4-214ENST00000545942 SDCBPO00560 298 aaPredicted RBP18.04■□□□□ 0.48
CHD4-214ENST00000545942 FGF16O43320 207 aa18.04■□□□□ 0.48
CHD4-214ENST00000545942 ORC5O43913 435 aa18.04■□□□□ 0.48
CHD4-214ENST00000545942 PF4P02776 101 aa18.04■□□□□ 0.48
CHD4-214ENST00000545942 CAPGP40121 348 aa18.04■□□□□ 0.48
CHD4-214ENST00000545942 ZNF816Q0VGE8 651 aaPredicted RBP18.04■□□□□ 0.48
CHD4-214ENST00000545942 KHDC1LQ5JSQ8 128 aa18.04■□□□□ 0.48
CHD4-214ENST00000545942 GLIPR1L1Q6UWM5 242 aa18.04■□□□□ 0.48
CHD4-214ENST00000545942 ZNF497Q6ZNH5 498 aa18.04■□□□□ 0.48
CHD4-214ENST00000545942 Q6ZPA2 131 aa18.04■□□□□ 0.48
CHD4-214ENST00000545942 CDH26Q8IXH8 852 aa18.04■□□□□ 0.48
CHD4-214ENST00000545942 C5orf56Q8N8D9 126 aa18.04■□□□□ 0.48
CHD4-214ENST00000545942 CCDC107Q8WV48 283 aa18.04■□□□□ 0.48
CHD4-214ENST00000545942 A0A1W2PPK0 400 aa18.03■□□□□ 0.48
CHD4-214ENST00000545942 AIPO00170 330 aa18.03■□□□□ 0.48
CHD4-214ENST00000545942 CCRL2O00421 344 aa18.03■□□□□ 0.48
CHD4-214ENST00000545942 IGKV1D-33P01593 117 aa18.03■□□□□ 0.48
CHD4-214ENST00000545942 IGKV1-33P01594 117 aa18.03■□□□□ 0.48
CHD4-214ENST00000545942 MT-ND4P03905 459 aa18.03■□□□□ 0.48
CHD4-214ENST00000545942 GAPDHP04406 335 aaKnown RBP18.03■□□□□ 0.48
CHD4-214ENST00000545942 GNAO1P09471 354 aa18.03■□□□□ 0.48
CHD4-214ENST00000545942 HNF4GQ14541 408 aa18.03■□□□□ 0.48
CHD4-214ENST00000545942 RCC2Q9P258 522 aaKnown RBP18.03■□□□□ 0.48
CHD4-214ENST00000545942 PSORS1C1Q9UIG5 152 aa18.03■□□□□ 0.48
CHD4-214ENST00000545942 NOTCH3Q9UM47 2321 aa18.03■□□□□ 0.48
CHD4-214ENST00000545942 PSMB11A5LHX3 300 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 MCRIP1C9JLW8 97 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 MYL12BO14950 172 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 MAS1P04201 325 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 IGLL1P15814 213 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 CELP19835 753 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 WNT4P56705 351 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 LOXL3P58215 753 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 AWAT2Q6E213 333 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 LAIR2Q6ISS4 152 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 AHSA2Q719I0 299 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 LINC00311Q8N616 119 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 C8orf31Q8N9H6 132 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 UBALD1Q8TB05 177 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 DERL3Q96Q80 235 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 GFOD1Q9NXC2 390 aa18.02■□□□□ 0.48
CHD4-214ENST00000545942 IGHV1-3A0A0C4DH29 117 aa18.01■□□□□ 0.47
CHD4-214ENST00000545942 CD1AP06126 327 aa18.01■□□□□ 0.47
CHD4-214ENST00000545942 REG1BP48304 166 aa18.01■□□□□ 0.47
CHD4-214ENST00000545942 DOC2BQ14184 412 aa18.01■□□□□ 0.47
CHD4-214ENST00000545942 OGFRL1Q5TC84 451 aaPredicted RBP18.01■□□□□ 0.47
CHD4-214ENST00000545942 MOB3BQ86TA1 216 aa18.01■□□□□ 0.47
CHD4-214ENST00000545942 MRAPQ8TCY5 172 aa18.01■□□□□ 0.47
CHD4-214ENST00000545942 CHPT1Q8WUD6 406 aa18.01■□□□□ 0.47
CHD4-214ENST00000545942 FBLIM1Q8WUP2 373 aa18.01■□□□□ 0.47
CHD4-214ENST00000545942 THRSPQ92748 146 aa18.01■□□□□ 0.47
CHD4-214ENST00000545942 RAB9BQ9NP90 201 aa18.01■□□□□ 0.47
CHD4-214ENST00000545942 PLCXD1Q9NUJ7 323 aa18.01■□□□□ 0.47
CHD4-214ENST00000545942 ETAA1Q9NY74 926 aa18.01■□□□□ 0.47
CHD4-214ENST00000545942 TRAPPC2LQ9UL33 140 aa18.01■□□□□ 0.47
CHD4-214ENST00000545942 PIN1P1O15428 100 aa18■□□□□ 0.47
CHD4-214ENST00000545942 SLC35A2P78381 396 aa18■□□□□ 0.47
CHD4-214ENST00000545942 EBI3Q14213 229 aa18■□□□□ 0.47
CHD4-214ENST00000545942 Q3ZCU0 254 aa18■□□□□ 0.47
CHD4-214ENST00000545942 FOXB2Q5VYV0 432 aa18■□□□□ 0.47
CHD4-214ENST00000545942 RAB12Q6IQ22 244 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms