RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 LINC00596Q86U02 117 aa9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 LHFPL3Q86UP9 236 aa9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 Q8N9W7 124 aa9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 SUMF2Q8NBJ7 301 aa9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 OR8H1Q8NGG4 311 aa9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 TSEN15Q8WW01 171 aaKnown RBP9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 PDCD1LG2Q9BQ51 273 aa9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 DPCDQ9BVM2 203 aaPredicted RBP9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 ISG20L2Q9H9L3 353 aaKnown RBP9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 IL36GQ9NZH8 169 aa9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 U3KQK5 164 aa9.43□□□□□ -0.9
CBX3P4-202ENST00000540428 A0A1W2PPE3 182 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 TMEM30CPA0ZSE6 113 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 LINC01548A6NM66 108 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 C15orf65H3BRN8 121 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 TXNL1O43396 289 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 ORC5O43913 435 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 RPLP1P05386 114 aaKnown RBP9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 GABRB1P18505 474 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 IL3RAP26951 378 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 ALDH3A2P51648 485 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 GBX2P52951 348 aaPredicted RBP9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 RAB25P57735 213 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 LPCAT4Q643R3 524 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 SATL1Q86VE3 508 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 TMEM104Q8NE00 496 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 OR51A2Q8NGJ7 313 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 OR10K1Q8NGX5 313 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 ST6GALNAC6Q969X2 333 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 Q96MT0 163 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 DUX3Q96PT4 197 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 JAM3Q9BX67 310 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 FAM192AQ9GZU8 254 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 ERVK13-1Q9NX77 482 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 ZNF580Q9UK33 172 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 ST3GAL6Q9Y274 331 aa9.42□□□□□ -0.9
CBX3P4-202ENST00000540428 IGHV3-72A0A0B4J1Y9 119 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 TRAV39A0A0B4J263 110 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 E9PI62 339 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 EI24O14681 340 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 OR7C1O76099 320 aaPredicted RBP9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 HTR3BO95264 441 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 MOSP00540 346 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 IGHG4P01861 327 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 CD2P06729 351 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 REG1BP48304 166 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 LUMP51884 338 aaPredicted RBP9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 ZNF137PP52743 207 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 RBM11P57052 281 aaKnown RBP9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 CFHR3Q02985 330 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 RAB40BQ12829 278 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 MPV17LQ2QL34 196 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 TMEM30BQ3MIR4 351 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 LCNL1Q6ZST4 164 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 OR52N1Q8NH53 320 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 C4orf3Q8WVX3 66 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 RTN4IP1Q8WWV3 396 aaPredicted RBP9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 ARL11Q969Q4 196 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 RASL11BQ9BPW5 248 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 CHCHD6Q9BRQ6 235 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 METTL9Q9H1A3 318 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 PLSCR3Q9NRY6 295 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 PAK1IP1Q9NWT1 392 aaPredicted RBP9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 GFOD1Q9NXC2 390 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 TAS2R4Q9NYW5 299 aa9.41□□□□□ -0.9
CBX3P4-202ENST00000540428 C3orf84H3BNL1 204 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 SDCBPO00560 298 aaPredicted RBP9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 ZNF780AO75290 641 aaPredicted RBP9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 CIB2O75838 187 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 CSTBP04080 98 aaKnown RBP9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 IGF1P05019 195 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 OR5H8P0DN80 308 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 VDAC1P21796 283 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 FHL3Q13643 280 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 DEFB136Q30KP8 78 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 ZIK1Q3SY52 487 aaPredicted RBP9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 CCDC58Q4VC31 144 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 FAM71E2Q8N5Q1 922 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 GPR148Q8TDV2 347 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 S1PR3Q99500 378 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 RAB9BQ9NP90 201 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 TMEM138Q9NPI0 162 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 MRPS18AQ9NVS2 196 aaKnown RBP9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 AASSQ9UDR5 926 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 SCOCQ9UIL1 159 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 GMPPBQ9Y5P6 360 aa9.4□□□□□ -0.9
CBX3P4-202ENST00000540428 SEC14L6B5MCN3 397 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 GEMIN2O14893 280 aaKnown RBP9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 CDRT1O95170 752 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 MT-ND4P03905 459 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 PSMB8P28062 276 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 CHATP28329 748 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 SOX6P35712 828 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 ZNF93P35789 620 aaPredicted RBP9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 ECI1P42126 302 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 SOX2P48431 317 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 INSL3P51460 131 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 PPP3R1P63098 170 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 NKAPLQ5M9Q1 402 aa9.39□□□□□ -0.91
CBX3P4-202ENST00000540428 STEAP3Q658P3 488 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms