RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 CLDN12P56749 244 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 RPL15P61313 204 aaKnown RBP14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 FAM189A2Q15884 450 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 LTC4SQ16873 150 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 MINOS1Q5TGZ0 78 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 GDPGP1Q6ZNW5 385 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 RTN4RL2Q86UN3 420 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 UBALD1Q8TB05 177 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 NDNFQ8TB73 568 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 LEAP2Q969E1 77 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 NICN1Q9BSH3 213 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 PLGRKTQ9HBL7 147 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 MINOS1-NBL1R4GNA1 71 aa14.77□□□□□ -0.05
SNRPA1-203ENST00000540017 A0A0A6YYD4 124 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 UBE2QL1A1L167 161 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 AIPO00170 330 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 PDCD6O75340 191 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 BPNT1O95861 308 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 HTR1DP28221 377 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 CHATP28329 748 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 OR10A3P58181 314 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 RBM39Q14498 530 aaKnown RBP14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 KCTD21Q4G0X4 260 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 FAM53AQ6NSI3 398 aaPredicted RBP14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 Q6ZSV7 163 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 GAPTQ8N292 157 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 OR4K15Q8NH41 348 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 KCNG3Q8TAE7 436 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 FCGR1BQ92637 280 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 TM2D1Q9BX74 207 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 TMEM59Q9BXS4 323 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 ETAA1Q9NY74 926 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 V9GY05 133 aa14.76□□□□□ -0.05
SNRPA1-203ENST00000540017 TRAV1-2A0A0B4J238 106 aa14.75□□□□□ -0.05
SNRPA1-203ENST00000540017 GZMHP20718 246 aa14.75□□□□□ -0.05
SNRPA1-203ENST00000540017 RAB11BQ15907 218 aa14.75□□□□□ -0.05
SNRPA1-203ENST00000540017 HLA-DRB5Q30154 266 aa14.75□□□□□ -0.05
SNRPA1-203ENST00000540017 C22orf42Q6IC83 251 aa14.75□□□□□ -0.05
SNRPA1-203ENST00000540017 CCBE1Q6UXH8 406 aaPredicted RBP14.75□□□□□ -0.05
SNRPA1-203ENST00000540017 OR51D1Q8NGF3 324 aa14.75□□□□□ -0.05
SNRPA1-203ENST00000540017 ZNF596Q8TC21 504 aa14.75□□□□□ -0.05
SNRPA1-203ENST00000540017 SULT4A1Q9BR01 284 aa14.75□□□□□ -0.05
SNRPA1-203ENST00000540017 LPAR5Q9H1C0 372 aa14.75□□□□□ -0.05
SNRPA1-203ENST00000540017 DPM3Q9P2X0 92 aa14.75□□□□□ -0.05
SNRPA1-203ENST00000540017 MMP24Q9Y5R2 645 aa14.75□□□□□ -0.05
SNRPA1-203ENST00000540017 LY6LH3BQJ8 138 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 CHST1O43916 411 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 GLAP06280 429 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 ARSBP15848 533 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 RCC1P18754 421 aaPredicted RBP14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 GALP22466 123 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 PLA2G7Q13093 441 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 NKAPLQ5M9Q1 402 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 SYT6Q5T7P8 510 aaPredicted RBP14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 HES5Q5TA89 166 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 DHRS7BQ6IAN0 325 aaPredicted RBP14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 C6orf201Q7Z4U5 140 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 C5orf24Q7Z6I8 188 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 NR2C2APQ86WQ0 139 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 OR4F5Q8NH21 305 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 LINC01006Q8NI28 216 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 ARL11Q969Q4 196 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 ZNF747Q9BV97 191 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 PSG11Q9UQ72 335 aa14.74□□□□□ -0.05
SNRPA1-203ENST00000540017 C12orf77C9JDV5 145 aa14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 BUB1B-PAK6H3BSN5 160 aa14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 J3QR06 171 aa14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 HAX1O00165 279 aa14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 TOR1AO14656 332 aa14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 ORC5O43913 435 aa14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 NEDD8Q15843 81 aa14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 C2orf76Q3KRA6 126 aa14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 OR2W3Q7Z3T1 314 aa14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 OR10A7Q8NGE5 316 aa14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 OR9G1Q8NH87 305 aa14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 MRPL30Q8TCC3 161 aaKnown RBP14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 FAM3DQ96BQ1 224 aa14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 FAAP24Q9BTP7 215 aa14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 BEX1Q9HBH7 125 aa14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 TXNL4BQ9NX01 149 aaKnown RBP14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 TRAPPC2LQ9UL33 140 aa14.73□□□□□ -0.05
SNRPA1-203ENST00000540017 IGHV3-43A0A0B4J1X8 118 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 A0A1W2PPE3 182 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 SMIM30A4D0T7 59 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 A6NDX4 124 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 POM121CA8CG34 1229 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 LDLRAD4O15165 306 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 SOCS1O15524 211 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 TSPAN9O75954 239 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 IGHV3-43DP0DP04 118 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 GNG10P50151 68 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 DYNLT3P51808 116 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 PRRX1P54821 245 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 LOXL3P58215 753 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 SRSF4Q08170 494 aaKnown RBP14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 FBLN7Q53RD9 439 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 TPTE2P1Q5T6R2 138 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 OLFML2AQ68BL7 652 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 Q6ZPA2 131 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 TMEM219Q86XT9 240 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms