RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 OR11H6Q8NGC7 330 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 KIRREL1Q96J84 757 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 C19orf24Q9BVV8 132 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 GAL3ST2Q9H3Q3 398 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 NCOR1P1Q9H4R4 102 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 LIN7BQ9HAP6 207 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 SPACA1Q9HBV2 294 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 ETAA1Q9NY74 926 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 OR6C3Q9NZP0 311 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 FBLN5Q9UBX5 448 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 NPIPB11E5RHQ5 1161 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 C15orf65H3BRN8 121 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 AIPO00170 330 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 BLVRBP30043 206 aaPredicted RBP12.78□□□□□ -0.36
RPAIN-206ENST00000539417 PSMD7P51665 324 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 DYNC1I2Q13409 638 aaKnown RBP12.78□□□□□ -0.36
RPAIN-206ENST00000539417 MIDNQ504T8 468 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 OLFML2AQ68BL7 652 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 GAPTQ8N292 157 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 KCTD7Q96MP8 289 aa12.78□□□□□ -0.36
RPAIN-206ENST00000539417 NOTOA8MTQ0 251 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 IL1AP01583 271 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 RCC1P18754 421 aaPredicted RBP12.77□□□□□ -0.37
RPAIN-206ENST00000539417 NFYBP25208 207 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 IER3P46695 156 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 VEGFCP49767 419 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 PLAC9Q5JTB6 97 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 LDLRAD3Q86YD5 345 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 ZNF565Q8N9K5 539 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 OR13F1Q8NGS4 319 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 OR13D1Q8NGV5 346 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 MRPL30Q8TCC3 161 aaKnown RBP12.77□□□□□ -0.37
RPAIN-206ENST00000539417 TMEM158Q8WZ71 300 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 HDHD3Q9BSH5 251 aaPredicted RBP12.77□□□□□ -0.37
RPAIN-206ENST00000539417 FUNDC2Q9BWH2 189 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 CHIAQ9BZP6 476 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 NAA50Q9GZZ1 169 aaKnown RBP12.77□□□□□ -0.37
RPAIN-206ENST00000539417 LINC00574Q9H8X3 128 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 VCX3AQ9NNX9 186 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 IDI2-AS1Q9NZ38 188 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 FAM96BQ9Y3D0 163 aa12.77□□□□□ -0.37
RPAIN-206ENST00000539417 C12orf77C9JDV5 145 aa12.76□□□□□ -0.37
RPAIN-206ENST00000539417 AIREO43918 545 aa12.76□□□□□ -0.37
RPAIN-206ENST00000539417 PAHP00439 452 aa12.76□□□□□ -0.37
RPAIN-206ENST00000539417 SNRPBP14678 240 aaKnown RBP12.76□□□□□ -0.37
RPAIN-206ENST00000539417 RBM39Q14498 530 aaKnown RBP12.76□□□□□ -0.37
RPAIN-206ENST00000539417 PLA1AQ53H76 456 aa12.76□□□□□ -0.37
RPAIN-206ENST00000539417 TPRA1Q86W33 373 aa12.76□□□□□ -0.37
RPAIN-206ENST00000539417 ABHD12Q8N2K0 398 aa12.76□□□□□ -0.37
RPAIN-206ENST00000539417 OR4P4Q8NGL7 312 aa12.76□□□□□ -0.37
RPAIN-206ENST00000539417 ARHGAP5-AS1Q96IT6 56 aa12.76□□□□□ -0.37
RPAIN-206ENST00000539417 NEDD4LQ96PU5 975 aa12.76□□□□□ -0.37
RPAIN-206ENST00000539417 JMJD8Q96S16 334 aa12.76□□□□□ -0.37
RPAIN-206ENST00000539417 CLEC7AQ9BXN2 247 aa12.76□□□□□ -0.37
RPAIN-206ENST00000539417 DAPK2Q9UIK4 370 aa12.76□□□□□ -0.37
RPAIN-206ENST00000539417 IGHV3-43A0A0B4J1X8 118 aa12.75□□□□□ -0.37
RPAIN-206ENST00000539417 TRIM77I1YAP6 450 aa12.75□□□□□ -0.37
RPAIN-206ENST00000539417 IGLV1-47P01700 117 aa12.75□□□□□ -0.37
RPAIN-206ENST00000539417 TFAP2AP05549 437 aa12.75□□□□□ -0.37
RPAIN-206ENST00000539417 GLAP06280 429 aa12.75□□□□□ -0.37
RPAIN-206ENST00000539417 RNASE1P07998 156 aaKnown RBP12.75□□□□□ -0.37
RPAIN-206ENST00000539417 FBP1P09467 338 aa12.75□□□□□ -0.37
RPAIN-206ENST00000539417 IGHV3-43DP0DP04 118 aa12.75□□□□□ -0.37
RPAIN-206ENST00000539417 SFXN4Q6P4A7 337 aa12.75□□□□□ -0.37
RPAIN-206ENST00000539417 OR1L1Q8NH94 360 aa12.75□□□□□ -0.37
RPAIN-206ENST00000539417 FAM216AQ8WUB2 273 aa12.75□□□□□ -0.37
RPAIN-206ENST00000539417 ARL11Q969Q4 196 aa12.75□□□□□ -0.37
RPAIN-206ENST00000539417 URM1Q9BTM9 101 aaKnown RBP12.75□□□□□ -0.37
RPAIN-206ENST00000539417 AK3Q9UIJ7 227 aa12.75□□□□□ -0.37
RPAIN-206ENST00000539417 RAB22AQ9UL26 194 aa12.75□□□□□ -0.37
RPAIN-206ENST00000539417 TRAPPC2LQ9UL33 140 aa12.75□□□□□ -0.37
RPAIN-206ENST00000539417 ANK2Q01484 3957 aa12.75□□□□□ -0.37
RPAIN-206ENST00000539417 TENM1Q9UKZ4 2725 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 A0A087X0M5 115 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 A0A1B0GX30 115 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 A0A1W2PPE3 182 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 CLDN34H7C241 214 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 CD34P28906 385 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 RAB13P51153 203 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 LGALS4P56470 323 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 NCS1P62166 190 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 SLC16A12Q6ZSM3 486 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 BEND2Q8NDZ0 799 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 OR5H6Q8NGV6 325 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 PIFOQ8TCI5 191 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 PECRQ9BY49 303 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 MEGF9Q9H1U4 602 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 PLEKHJ1Q9NW61 149 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 KCNK7Q9Y2U2 307 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 HILPDAQ9Y5L2 63 aa12.74□□□□□ -0.37
RPAIN-206ENST00000539417 A6NHS1 94 aa12.73□□□□□ -0.37
RPAIN-206ENST00000539417 GZMHP20718 246 aa12.73□□□□□ -0.37
RPAIN-206ENST00000539417 RPS19P39019 145 aaKnown RBP12.73□□□□□ -0.37
RPAIN-206ENST00000539417 ALDH3B2P48448 385 aa12.73□□□□□ -0.37
RPAIN-206ENST00000539417 GNG10P50151 68 aa12.73□□□□□ -0.37
RPAIN-206ENST00000539417 LOXL3P58215 753 aa12.73□□□□□ -0.37
RPAIN-206ENST00000539417 SSX2Q16385 188 aa12.73□□□□□ -0.37
RPAIN-206ENST00000539417 FBLN7Q53RD9 439 aa12.73□□□□□ -0.37
RPAIN-206ENST00000539417 GDPGP1Q6ZNW5 385 aa12.73□□□□□ -0.37
RPAIN-206ENST00000539417 PRR18Q8N4B5 295 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms