RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 KLK12Q9UKR0 248 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 ARID1AO14497 2285 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 CABIN1Q9Y6J0 2220 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 ANKRD12Q6UB98 2062 aa1.94□□□□□ -2.1
SNHG1-210ENST00000539303 MYO15BQ96JP2 1530 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 DNMT1P26358 1616 aaKnown RBP1.93□□□□□ -2.1
SNHG1-210ENST00000539303 IGLV4-69A0A075B6H9 119 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 IGLV3-16A0A075B6K0 115 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 M0QYV0 167 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 KCNK1O00180 336 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 TCF21O43680 179 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 OR5F1O95221 314 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 HBZP02008 142 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 TCRBP04435 133 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 HIST1H1EP10412 219 aaKnown RBP1.93□□□□□ -2.1
SNHG1-210ENST00000539303 CD28P10747 220 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 GTF2F2P13984 249 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 CXCL2P19875 107 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 CXCL3P19876 107 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 GADD45AP24522 165 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 S100A2P29034 98 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 PMELP40967 661 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 OPRK1P41145 380 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 SLCO1A2P46721 670 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 OMPP47874 163 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 ZNF83P51522 516 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 LSM6P62312 80 aaKnown RBP1.93□□□□□ -2.1
SNHG1-210ENST00000539303 SLC35A2P78381 396 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 PDK2Q15119 407 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 RSU1Q15404 277 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 LINC00303Q3SY05 128 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 KLHL12Q53G59 568 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 AKIRIN2Q53H80 203 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 ELP2Q6IA86 826 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 SPOPLQ6IQ16 392 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 SCGB1D4Q6XE38 83 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 TCF23Q7RTU1 214 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 DPPA2Q7Z7J5 298 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 MARCH3Q86UD3 253 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 SLC51BQ86UW2 128 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 NAA40Q86UY6 237 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 GID4Q8IVV7 300 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 OR2K2Q8NGT1 345 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 OR1P1Q8NH06 330 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 OR10D3Q8NH80 312 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 OR5K1Q8NHB7 308 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 MFSD8Q8NHS3 518 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 C16orf78Q8WTQ4 265 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 TNFAIP8L1Q8WVP5 186 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 CLDN23Q96B33 292 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 L3HYPDHQ96EM0 354 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 GPR82Q96P67 336 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 DOK1Q99704 481 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 THTPAQ9BU02 230 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 C9orf16Q9BUW7 83 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 VCXQ9H320 206 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 TMEM216Q9P0N5 145 aa1.93□□□□□ -2.1
SNHG1-210ENST00000539303 CLUHO75153 1309 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 PTPRKQ15262 1439 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 TNS2Q63HR2 1409 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 TUBGCP6Q96RT7 1819 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 TGIF2-C20orf24A0A0A6YYL0 155 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 IGHV1-3A0A0C4DH29 117 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 TEX50A0A1B0GTY4 177 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 EVPLLA8MZ36 301 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 ZNF207O43670 478 aaKnown RBP1.92□□□□□ -2.1
SNHG1-210ENST00000539303 NSA2O95478 260 aaKnown RBP1.92□□□□□ -2.1
SNHG1-210ENST00000539303 KRT75O95678 551 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 HLA-DRAP01903 254 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 IL6P05231 212 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 IL3P08700 152 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 NELFEP18615 380 aaKnown RBP1.92□□□□□ -2.1
SNHG1-210ENST00000539303 MYL12AP19105 171 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 MIPP30301 263 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 MPIP34949 423 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 TGFBR1P36897 503 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 H2BFSP57053 126 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 VBP1P61758 197 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 DAD1P61803 113 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 ELF3P78545 371 aaPredicted RBP1.92□□□□□ -2.1
SNHG1-210ENST00000539303 CCL7P80098 99 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 HPCAP84074 193 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 SRSF6Q13247 344 aaKnown RBP1.92□□□□□ -2.1
SNHG1-210ENST00000539303 BTN1A1Q13410 526 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 EBI3Q14213 229 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 TMED2Q15363 201 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 SPA17Q15506 151 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 HENMT1Q5T8I9 393 aaKnown RBP1.92□□□□□ -2.1
SNHG1-210ENST00000539303 SYPL2Q5VXT5 272 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 NANOGP8Q6NSW7 305 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 FAM173BQ6P4H8 233 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 MORN3Q6PF18 240 aaPredicted RBP1.92□□□□□ -2.1
SNHG1-210ENST00000539303 VN1R4Q7Z5H5 301 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 DOLPP1Q86YN1 238 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 ZNF695Q8IW36 515 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 OR2M3Q8NG83 312 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 GPR32P1Q8NGA4 272 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 OR9A2Q8NGT5 310 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 ZNRF2Q8NHG8 242 aa1.92□□□□□ -2.1
SNHG1-210ENST00000539303 EEF1AKMT1Q8WVE0 214 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms