RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 Q8NAQ8 132 aa6.78□□□□□ -1.32
PRKAB1-204ENST00000538271 RTN4IP1Q8WWV3 396 aaPredicted RBP6.78□□□□□ -1.32
PRKAB1-204ENST00000538271 TAMM41Q96BW9 452 aa6.78□□□□□ -1.32
PRKAB1-204ENST00000538271 NIPAL2Q9H841 368 aa6.78□□□□□ -1.32
PRKAB1-204ENST00000538271 UBQLN2Q9UHD9 624 aa6.78□□□□□ -1.32
PRKAB1-204ENST00000538271 SH3GLB1Q9Y371 365 aa6.78□□□□□ -1.32
PRKAB1-204ENST00000538271 ODAMA1E959 279 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 FUOMA2VDF0 154 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 TVP23AA6NH52 213 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 CXCR6O00574 342 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 APOC1P02654 83 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 ZNF91Q05481 1191 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 C5orf64Q2M2E5 130 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 AKIRIN2Q53H80 203 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 LCN1P1Q5VSP4 162 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 ZNF57Q68EA5 555 aaPredicted RBP6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 UNQ5815/PRO19632Q6UWF5 114 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 KCTD20Q7Z5Y7 419 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 KIRREL3Q8IZU9 778 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 C15orf53Q8NAA6 179 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 FAM81AQ8TBF8 368 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 CSTL1Q9H114 145 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 PSMC3IPQ9P2W1 217 aaPredicted RBP6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 IL36RNQ9UBH0 155 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 RNF150Q9ULK6 438 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 CORO2BQ9UQ03 480 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 SNX13Q9Y5W8 968 aa6.77□□□□□ -1.33
PRKAB1-204ENST00000538271 MPTX1A8MV57 137 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 CGB3P0DN86 165 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 CGB7P0DN87 165 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 GPX2P18283 190 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 GCSHP23434 173 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 DUSP1P28562 367 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 RPS6KA3P51812 740 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 ST3GAL3Q11203 375 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 IL24Q13007 206 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 LTC4SQ16873 150 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 ZNF343Q6P1L6 599 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 ASCL4Q6XD76 172 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 ZNF781Q8N8C0 355 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 SLC26A7Q8TE54 656 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 ABHD5Q8WTS1 349 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 GALNT14Q96FL9 552 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 RITA1Q96K30 269 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 CEP19Q96LK0 163 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 RDH12Q96NR8 316 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 NEU1Q99519 415 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 SRSF8Q9BRL6 282 aaKnown RBP6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 OSBPL10Q9BXB5 764 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 PARP12Q9H0J9 701 aaKnown RBP6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 KRT84Q9NSB2 600 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 FAM212BQ9NTI7 297 aaPredicted RBP6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 IDI2-AS1Q9NZ38 188 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 MTCH1Q9NZJ7 389 aa6.76□□□□□ -1.33
PRKAB1-204ENST00000538271 DHRS12A0PJE2 317 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 PQLC2LA1A4F0 135 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 PPIBP23284 216 aaKnown RBP6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 VHLP40337 213 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 FAM3BP58499 235 aaPredicted RBP6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 CX3CL1P78423 397 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 NHLH2Q02577 135 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 BNIP1Q12981 228 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 C12orf74Q32Q52 190 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 ZNF684Q5T5D7 378 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 DPY19L2P2Q6ZN68 376 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 PPP1R27Q86WC6 154 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 C11orf65Q8NCR3 313 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 LFNGQ8NES3 379 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 SPATA4Q8NEY3 305 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 OR1L6Q8NGR2 347 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 OR4K13Q8NH42 304 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 LZICQ8WZA0 190 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 SNAPC3Q92966 411 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 FAM103A1Q9BTL3 118 aaKnown RBP6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 GMEB1Q9Y692 573 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 SAR1BQ9Y6B6 198 aa6.75□□□□□ -1.33
PRKAB1-204ENST00000538271 IGHV4-28A0A0C4DH34 117 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 KRTAP23-1A1A580 65 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 LOC110117498-PIK3R3F6TDL0 507 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 SIRPB1O00241 398 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 NBR2O15453 112 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 INMTO95050 263 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 HTR1FP30939 366 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 PYCR1P32322 319 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 POLR2JP52435 117 aaKnown RBP6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 PTTG1IPP53801 180 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 FXYD6P3P58550 94 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 MED22Q15528 200 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 SLC16A12Q6ZSM3 486 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 ASRGL1Q7L266 308 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 OR2C3Q8N628 320 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 POC5Q8NA72 575 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 CACNG8Q8WXS5 425 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 COQ2Q96H96 371 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 ERMAPQ96PL5 475 aaPredicted RBP6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 NICN1Q9BSH3 213 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 YTHDF1Q9BYJ9 559 aaKnown RBP6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 PKIBQ9C010 78 aa6.74□□□□□ -1.33
PRKAB1-204ENST00000538271 PPIL3Q9H2H8 161 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms