RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 MAP2K4P45985 399 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 TPBGQ13641 420 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 RBM48Q5RL73 367 aaKnown RBP11.86□□□□□ -0.51
USP28-204ENST00000537642 SIGIRRQ6IA17 410 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 RAB12Q6IQ22 244 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 C11orf88Q6PI97 169 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 Q6ZS46 218 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 PRSS48Q7RTY5 328 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 KLHDC1Q8N7A1 406 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 CCDC107Q8WV48 283 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 PHYHIPQ92561 330 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 TMEM203Q969S6 136 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 CNBD2Q96M20 576 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 CCDC90BQ9GZT6 254 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 ISYNA1Q9NPH2 558 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 SERTAD4Q9NUC0 356 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 PSG11Q9UQ72 335 aa11.86□□□□□ -0.51
USP28-204ENST00000537642 VWFP04275 2813 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 FAM90A10PA6NDY2 464 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 FAM90A18PA6NE21 464 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 FAM90A16PA6NEW6 464 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 FAM90A20PA6NIJ5 464 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 FAM90A7PA6NKC0 464 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 FAM90A12PA8MX19 464 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 FAM90A5PA8MXJ8 464 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 FAM90A23PA8MXZ1 464 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 MCRIP1C9JLW8 97 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 AIPO00170 330 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 ATP6V1G2O95670 118 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 FAM90A15PP0C7V4 464 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 FAM90A13PP0C7W8 464 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 FAM90A14PP0C7W9 464 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 FAM90A24PP0C7X0 464 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 CD37P11049 281 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 SRMP19623 302 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 BRS3P32247 399 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 GNG10P50151 68 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 RPS25P62851 125 aaKnown RBP11.85□□□□□ -0.51
USP28-204ENST00000537642 BLCAPP62952 87 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 MLLT11Q13015 90 aaPredicted RBP11.85□□□□□ -0.51
USP28-204ENST00000537642 HERPUD1Q15011 391 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 HSD17B12Q53GQ0 312 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 C1orf100Q5SVJ3 147 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 HIST2H2BDQ6DRA6 164 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 TMEM91Q6ZNR0 172 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 GAPTQ8N292 157 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 DTX3Q8N9I9 347 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 UBALD1Q8TB05 177 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 ARL11Q969Q4 196 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 FAM46BQ96A09 425 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 PRSS22Q9GZN4 317 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 ETAA1Q9NY74 926 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 GHRLQ9UBU3 117 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 PEX16Q9Y5Y5 336 aa11.85□□□□□ -0.51
USP28-204ENST00000537642 OOSP1A8MZH6 123 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 ORC5O43913 435 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 TSPAN15O95858 294 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 VSIG10L2P0DP72 767 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 CPEP16870 476 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 ARHGDIBP52566 201 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 DIAPH2-AS1Q14236 149 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 GLT8D1Q68CQ7 371 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 OR10K2Q6IF99 312 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 SLC16A12Q6ZSM3 486 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 Q6ZTK2 550 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 C16orf82Q7Z2V1 217 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 CFHR4Q92496 578 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 TOMM40LQ969M1 308 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 RPEQ96AT9 228 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 LIN7BQ9HAP6 207 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 RAB26Q9ULW5 256 aa11.84□□□□□ -0.51
USP28-204ENST00000537642 AMMECR1Q9Y4X0 333 aaPredicted RBP11.84□□□□□ -0.51
USP28-204ENST00000537642 A0A1W2PPE3 182 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 MPIG6BO95866 241 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 GLAP06280 429 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 UBBP0CG47 229 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 VSIG8P0DPA2 414 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 FUT3P21217 361 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 MNDAP41218 407 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 LOXL3P58215 753 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 SYT6Q5T7P8 510 aaPredicted RBP11.83□□□□□ -0.52
USP28-204ENST00000537642 FAM53AQ6NSI3 398 aaPredicted RBP11.83□□□□□ -0.52
USP28-204ENST00000537642 CCDC144NLQ6NUI1 221 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 C11orf44Q8N8P7 122 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 OR52M1Q8NGK5 317 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 OR4K15Q8NH41 348 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 GFI1Q99684 422 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 MGLLQ99685 303 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 SLC25A33Q9BSK2 321 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 CST11Q9H112 138 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 MMP27Q9H306 513 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 KCNK15Q9H427 330 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 GFOD1Q9NXC2 390 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 TRAPPC2LQ9UL33 140 aa11.83□□□□□ -0.52
USP28-204ENST00000537642 IGHV3-43A0A0B4J1X8 118 aa11.82□□□□□ -0.52
USP28-204ENST00000537642 A0A1W2PPI3 338 aa11.82□□□□□ -0.52
USP28-204ENST00000537642 UBE2QL1A1L167 161 aa11.82□□□□□ -0.52
USP28-204ENST00000537642 FAM90A9PA6NNJ1 464 aa11.82□□□□□ -0.52
USP28-204ENST00000537642 C12orf77C9JDV5 145 aa11.82□□□□□ -0.52
USP28-204ENST00000537642 H3BUI4 141 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms