RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 F2RL2O00254 374 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 TOR1AO14656 332 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 TIMM23O14925 209 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 ORC5O43913 435 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 MT-ND4P03905 459 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 UBBP0CG47 229 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 CPEP16870 476 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 SSTR5P35346 364 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 RBM39Q14498 530 aaKnown RBP13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 TRAM1Q15629 374 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 ATAD3CQ5T2N8 411 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 TMEM91Q6ZNR0 172 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 CEACAM19Q7Z692 300 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 OR52M1Q8NGK5 317 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 OR2T6Q8NHC8 308 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 ZNF702PQ9H963 129 aa13.81□□□□□ -0.2
SFSWAP-205ENST00000537164 MCRIP1C9JLW8 97 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 H3BUI4 141 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 CA11O75493 328 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 NFYBP25208 207 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 PSMA1P25786 263 aaKnown RBP13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 BRS3P32247 399 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 ARHGDIBP52566 201 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 TBCEQ15813 527 aaPredicted RBP13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 HSD17B12Q53GQ0 312 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 TPTE2P1Q5T6R2 138 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 GLT8D1Q68CQ7 371 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 SIGIRRQ6IA17 410 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 TREML4Q6UXN2 200 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 C16orf82Q7Z2V1 217 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 TMEM219Q86XT9 240 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 CNBD2Q96M20 576 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 SELENOIQ9C0D9 397 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 CST11Q9H112 138 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 BANF2Q9H503 90 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 BLOC1S6Q9UL45 172 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 PSG11Q9UQ72 335 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 SIGLEC9Q9Y336 463 aa13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 AMMECR1Q9Y4X0 333 aaPredicted RBP13.8□□□□□ -0.2
SFSWAP-205ENST00000537164 SLC22A1O15245 554 aa13.79□□□□□ -0.2
SFSWAP-205ENST00000537164 CRTAPO75718 401 aaPredicted RBP13.79□□□□□ -0.2
SFSWAP-205ENST00000537164 FUT3P21217 361 aa13.79□□□□□ -0.2
SFSWAP-205ENST00000537164 VHLP40337 213 aa13.79□□□□□ -0.2
SFSWAP-205ENST00000537164 Q3ZCU0 254 aa13.79□□□□□ -0.2
SFSWAP-205ENST00000537164 RAB12Q6IQ22 244 aa13.79□□□□□ -0.2
SFSWAP-205ENST00000537164 CCDC144NLQ6NUI1 221 aa13.79□□□□□ -0.2
SFSWAP-205ENST00000537164 C8orf31Q8N9H6 132 aa13.79□□□□□ -0.2
SFSWAP-205ENST00000537164 RFESDQ8TAC1 157 aa13.79□□□□□ -0.2
SFSWAP-205ENST00000537164 CFHR4Q92496 578 aa13.79□□□□□ -0.2
SFSWAP-205ENST00000537164 MGLLQ99685 303 aa13.79□□□□□ -0.2
SFSWAP-205ENST00000537164 LIN7BQ9HAP6 207 aa13.79□□□□□ -0.2
SFSWAP-205ENST00000537164 SERTAD4Q9NUC0 356 aa13.79□□□□□ -0.2
SFSWAP-205ENST00000537164 NOTCH1P46531 2555 aa13.78□□□□□ -0.2
SFSWAP-205ENST00000537164 TET2Q6N021 2002 aaPredicted RBP13.78□□□□□ -0.2
SFSWAP-205ENST00000537164 TRAV39A0A0B4J263 110 aa13.78□□□□□ -0.2
SFSWAP-205ENST00000537164 FAM90A9PA6NNJ1 464 aa13.78□□□□□ -0.2
SFSWAP-205ENST00000537164 M0QZ24 198 aa13.78□□□□□ -0.2
SFSWAP-205ENST00000537164 AIPO00170 330 aa13.78□□□□□ -0.2
SFSWAP-205ENST00000537164 VSIG8P0DPA2 414 aa13.78□□□□□ -0.2
SFSWAP-205ENST00000537164 LOXL3P58215 753 aa13.78□□□□□ -0.2
SFSWAP-205ENST00000537164 NEK7Q8TDX7 302 aa13.78□□□□□ -0.2
SFSWAP-205ENST00000537164 WIPF2Q8TF74 440 aaPredicted RBP13.78□□□□□ -0.2
SFSWAP-205ENST00000537164 TMEM203Q969S6 136 aa13.78□□□□□ -0.2
SFSWAP-205ENST00000537164 PRSS22Q9GZN4 317 aa13.78□□□□□ -0.2
SFSWAP-205ENST00000537164 CCDC90BQ9GZT6 254 aa13.78□□□□□ -0.2
SFSWAP-205ENST00000537164 PEX16Q9Y5Y5 336 aa13.78□□□□□ -0.2
SFSWAP-205ENST00000537164 MRPS14O60783 128 aaKnown RBP13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 PDCD6O75340 191 aa13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 ARL6IP5O75915 188 aa13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 HSMCR30P0CW71 290 aa13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 MAP2K4P45985 399 aa13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 RPS25P62851 125 aaKnown RBP13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 QRFPP83859 136 aa13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 MADCAM1Q13477 382 aa13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 HERPUD1Q15011 391 aa13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 TMEM30BQ3MIR4 351 aa13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 ZNF554Q86TJ5 538 aa13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 THNSL2Q86YJ6 484 aa13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 LINC00311Q8N616 119 aa13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 LEAP2Q969E1 77 aa13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 ARL11Q969Q4 196 aa13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 MBNL3Q9NUK0 354 aaKnown RBP13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 ETAA1Q9NY74 926 aa13.77□□□□□ -0.21
SFSWAP-205ENST00000537164 TMEM14DPA8MWL7 114 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 HTR2CP28335 458 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 MNDAP41218 407 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 GABARAPL2P60520 117 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 BLCAPP62952 87 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 RPS27AP62979 156 aaKnown RBP13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 SYT6Q5T7P8 510 aaPredicted RBP13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 TRAT1Q6PIZ9 186 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 ZNF367Q7RTV3 350 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 KLHDC1Q8N7A1 406 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 OR6M1Q8NGM8 313 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 KCNG3Q8TAE7 436 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 CCDC107Q8WV48 283 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 FAM46BQ96A09 425 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 RPEQ96AT9 228 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 AKR1E2Q96JD6 320 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 RBM14Q96PK6 669 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms