RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 IGKV1D-33P01593 117 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 IGKV1-33P01594 117 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 IL6RP08887 468 aaPredicted RBP5.93□□□□□ -1.46
CPSF7-215ENST00000536145 FAM90A15PP0C7V4 464 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 FAM90A13PP0C7W8 464 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 FAM90A14PP0C7W9 464 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 FAM90A24PP0C7X0 464 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 IGKV1-13P0DP09 117 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 NR2C1P13056 603 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 IRF2P14316 349 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 RBM11P57052 281 aaKnown RBP5.93□□□□□ -1.46
CPSF7-215ENST00000536145 HNRNPKP61978 463 aaKnown RBP eCLIP5.93□□□□□ -1.46
CPSF7-215ENST00000536145 GNB2P62879 340 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 LCN2P80188 198 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 SHBQ15464 509 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 TRIP6Q15654 476 aaKnown RBP5.93□□□□□ -1.46
CPSF7-215ENST00000536145 RSPO4Q2I0M5 234 aaPredicted RBP5.93□□□□□ -1.46
CPSF7-215ENST00000536145 PIGYQ3MUY2 71 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 TMEM31Q5JXX7 168 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 KIAA0895LQ68EN5 471 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 LCN15Q6UWW0 184 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 ZNF818PQ6ZRF7 136 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 WDR5BQ86VZ2 330 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 C17orf78Q8N4C9 275 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 FADS6Q8N9I5 356 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 GJC3Q8NFK1 279 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 OR2T10Q8NGZ9 312 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 TMEM37Q8WXS4 190 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 ZNF799Q96GE5 643 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 RAB40CQ96S21 281 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 SLC7A10Q9NS82 523 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 SEMA5BQ9P283 1151 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 COPS7AQ9UBW8 275 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 TP53TG3Q9ULZ0 132 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 PXMP4Q9Y6I8 212 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 CACNA1CQ13936 2221 aa5.93□□□□□ -1.46
CPSF7-215ENST00000536145 IGKV1-6A0A0C4DH72 117 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 A0A1W2PNR3 127 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 MAP1LC3B2A6NCE7 125 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 LRRC3CA6NJW4 275 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 A6NNC1 897 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 NPIPA2E9PIF3 369 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 H3BML4 177 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 DHHO43323 396 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 GALR2O43603 387 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-215ENST00000536145 SOX15O60248 233 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 ZNF737O75373 536 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 PGLYRP1O75594 196 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-215ENST00000536145 OR2J2O76002 312 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 HPRT1P00492 218 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 IGKV1-39P01597 117 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 IGLV3-19P01714 112 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 HLA-HP01893 362 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 GYPAP02724 150 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 LCATP04180 440 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 IGKV1D-39P04432 117 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 SELEP16581 610 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 GABRG2P18507 467 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 TCN2P20062 427 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 FBLP22087 321 aaKnown RBP5.92□□□□□ -1.46
CPSF7-215ENST00000536145 NPPCP23582 126 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 BRS3P32247 399 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 OR3A1P47881 315 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 COMPP49747 757 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-215ENST00000536145 TNFSF10P50591 281 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 CNN1P51911 297 aaKnown RBP5.92□□□□□ -1.46
CPSF7-215ENST00000536145 FGF8P55075 233 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-215ENST00000536145 LINC00310P59036 64 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 UBE2NP61088 152 aaKnown RBP5.92□□□□□ -1.46
CPSF7-215ENST00000536145 YPEL3P61236 119 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-215ENST00000536145 SELENOTP62341 195 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 TMEM267Q0VDI3 215 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-215ENST00000536145 MALLQ13021 153 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 CNN3Q15417 329 aaKnown RBP5.92□□□□□ -1.46
CPSF7-215ENST00000536145 NSDHLQ15738 373 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 ADIRFQ15847 76 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 ARSJQ5FYB0 599 aaPredicted RBP5.92□□□□□ -1.46
CPSF7-215ENST00000536145 C1orf189Q5VU69 101 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 FBXW9Q5XUX1 488 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 BRICD5Q6PL45 260 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 PCSK4Q6UW60 755 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 PARM1Q6UWI2 310 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 TMEM92Q6UXU6 159 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 Q6ZRM9 215 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 GAPTQ8N292 157 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 ARL6IP6Q8N6S5 226 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 TMEM217Q8N7C4 229 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 OR1L3Q8NH93 324 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 NAT6Q93015 286 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 LSM10Q969L4 123 aaKnown RBP5.92□□□□□ -1.46
CPSF7-215ENST00000536145 PINX1Q96BK5 328 aaKnown RBP5.92□□□□□ -1.46
CPSF7-215ENST00000536145 WDYHV1Q96HA8 205 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 OR5B12Q96R08 314 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 DIRC2Q96SL1 478 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 SMIM7Q9BQ49 75 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 MIEN1Q9BRT3 115 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 MAP1LC3BQ9GZQ8 125 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 WDR61Q9GZS3 305 aaKnown RBP5.92□□□□□ -1.46
CPSF7-215ENST00000536145 PARLQ9H300 379 aa5.92□□□□□ -1.46
CPSF7-215ENST00000536145 OR51I2Q9H344 312 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms