RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 ABRACLQ9P1F3 81 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 MPC1Q9Y5U8 109 aa7.07□□□□□ -1.28
SFSWAP-202ENST00000535202 MEX3AA1L020 520 aaKnown RBP7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 TMEM210A6NLX4 147 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 CLDN34H7C241 214 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 GABRPO00591 440 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 HOXA3O43365 443 aaPredicted RBP7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 FCN3O75636 299 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 CST4P01036 141 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 MMP9P14780 707 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 MUC1P15941 1255 aaPredicted RBP7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 ALOX5APP20292 161 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 CEACAM6P40199 344 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 KCNJ3P48549 501 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 ARF6P62330 175 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 HABP2Q14520 560 aaPredicted RBP7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 PEA15Q15121 130 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 SSX2Q16385 188 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 OR2B11Q5JQS5 317 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 WDR38Q5JTN6 314 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 ATPAF1Q5TC12 328 aaPredicted RBP7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 ALKAL2Q6UX46 152 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 SLC36A1Q7Z2H8 476 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 REC114Q7Z4M0 266 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 COMMD2Q86X83 199 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 ANGPTL5Q86XS5 388 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 ZDHHC23Q8IYP9 409 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 PUSL1Q8N0Z8 303 aaKnown RBP7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 FAM216BQ8N7L0 139 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 BEST4Q8NFU0 473 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 OR10K1Q8NGX5 313 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 SMIM4Q8WVI0 70 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 GATAD2BQ8WXI9 593 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 OR5P3Q8WZ94 311 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 LHX4Q969G2 390 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 MALSU1Q96EH3 234 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 ZNF747Q9BV97 191 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 ARL6Q9H0F7 186 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 TLNRD1Q9H1K6 362 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 UNKLQ9H9P5 680 aaKnown RBP7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 SMCO4Q9NRQ5 59 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 KAAG1Q9UBP8 84 aa7.06□□□□□ -1.28
SFSWAP-202ENST00000535202 IGHV1-69DA0A0B4J2H0 117 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 CENPVL3A0A0U1RRI6 287 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 TMEM269A0A1B0GVZ9 245 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 UBE2QL1A1L167 161 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 NKX6-3A6NJ46 265 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 SRRM5B3KS81 715 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 M0R129 80 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 SPRY1O43609 319 aaPredicted RBP7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 NDUFB3O43676 98 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 LANCL1O43813 399 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 OR2F2O95006 317 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 IGHV1-69P01742 117 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 MT-ND4LP03901 98 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 RCC1P18754 421 aaPredicted RBP7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 OMGP23515 440 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 RAB5CP51148 216 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 GPM6AP51674 278 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 BPIFB3P59826 476 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 RAB2AP61019 212 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 IL13RA1P78552 427 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 SRSF4Q08170 494 aaKnown RBP7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 OR2F1Q13607 317 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 HNF4GQ14541 408 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 PDCD1Q15116 288 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 HMGN3Q15651 99 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 KCTD18Q6PI47 426 aaPredicted RBP7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 IL34Q6ZMJ4 242 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 SSX9Q7RTT3 188 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 SLC16A13Q7RTY0 426 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 SERPINA12Q8IW75 414 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 SCCPDHQ8NBX0 429 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 SGMS2Q8NHU3 365 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 HPSE2Q8WWQ2 592 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 RFKQ969G6 155 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 FAM71F1Q96KD3 344 aaPredicted RBP7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 HIST1H2AAQ96QV6 131 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 OR8B4Q96RC9 309 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 CNN2Q99439 309 aaKnown RBP7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 PFDN5Q99471 154 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 NEU1Q99519 415 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 TEAD3Q99594 435 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 FGF23Q9GZV9 251 aaPredicted RBP7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 SIRPDQ9H106 197 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 WDR13Q9H1Z4 485 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 CNTD2Q9H8S5 307 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 FAM206AQ9NX38 181 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 ONECUT1Q9UBC0 465 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 DNAJB11Q9UBS4 358 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 RPUSD1Q9UJJ7 312 aaKnown RBP7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 ZNF391Q9UJN7 358 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 IKZF2Q9UKS7 526 aa7.05□□□□□ -1.28
SFSWAP-202ENST00000535202 ZNF816-ZNF321PA0A0X1KG74 233 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 ACOD1A6NK06 481 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 RFPL4AA6NLU0 287 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 COLCA2A8K830 154 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 PRR32B1ATL7 298 aa7.04□□□□□ -1.28
SFSWAP-202ENST00000535202 ZNF732B4DXR9 585 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms