RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 COMMD6Q7Z4G1 85 aa3.7□□□□□ -1.82
CASP4-213ENST00000534356 TCAIMQ8N3R3 496 aa3.7□□□□□ -1.82
CASP4-213ENST00000534356 OR52E4Q8NGH9 312 aa3.7□□□□□ -1.82
CASP4-213ENST00000534356 C22orf15Q8WYQ4 148 aa3.7□□□□□ -1.82
CASP4-213ENST00000534356 EBPLQ9BY08 206 aa3.7□□□□□ -1.82
CASP4-213ENST00000534356 STMN4Q9H169 189 aaPredicted RBP3.7□□□□□ -1.82
CASP4-213ENST00000534356 NTN4Q9HB63 628 aa3.7□□□□□ -1.82
CASP4-213ENST00000534356 FAM240BA0A1B0GVZ2 78 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 GOLGA8OA6NCC3 632 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 ZNF716A6NP11 495 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 GOLGA8NF8WBI6 632 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 H0YHG0 523 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 GOSR2O14653 212 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 CDH16O75309 829 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 ENTPD5O75356 428 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 EIF3GO75821 320 aaKnown RBP eCLIP3.69□□□□□ -1.82
CASP4-213ENST00000534356 CIB2O75838 187 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 H6PDO95479 791 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 ZNF735P0CB33 412 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 KITLGP21583 273 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 CDKN1BP46527 198 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 RAB10P61026 200 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 FOXF1Q12946 379 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 PPP1R7Q15435 360 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 CPTPQ5TA50 214 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 ANKRD26P1Q6NSI1 321 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 TMEM107Q6UX40 140 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 C19orf35Q6ZS72 473 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 ZDHHC22Q8N966 263 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 HSD17B11Q8NBQ5 300 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 SGMS2Q8NHU3 365 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 STMN2Q93045 179 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 GPR22Q99680 433 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 SH3GL3Q99963 347 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 SNX24Q9Y343 169 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 KCNE3Q9Y6H6 103 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 TET2Q6N021 2002 aaPredicted RBP3.69□□□□□ -1.82
CASP4-213ENST00000534356 DNAH9Q9NYC9 4486 aa3.69□□□□□ -1.82
CASP4-213ENST00000534356 IGLV3-32A0A0A0MS00 114 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 GOLGA8QA0A0J9YX86 632 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 OR5H1A6NKK0 313 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 H0Y8G0 127 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 H7C417 338 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 GOLGA8RI6L899 631 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 C6orf47O95873 294 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 PRPS2P11908 318 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 GFAPP14136 432 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 GGT1P19440 569 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 COL8A2P25067 703 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 CASQ1P31415 396 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 SERPINB5P36952 375 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 ATP6V0D1P61421 351 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 RPL23AP62750 156 aaKnown RBP3.68□□□□□ -1.82
CASP4-213ENST00000534356 MRPS22P82650 360 aaKnown RBP3.68□□□□□ -1.82
CASP4-213ENST00000534356 BST1Q10588 318 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 GABRA6Q16445 453 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 ATP6AP1LQ52LC2 224 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 CDKL4Q5MAI5 379 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 ZNF493Q6ZR52 646 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 ABHD12BQ7Z5M8 362 aaPredicted RBP3.68□□□□□ -1.82
CASP4-213ENST00000534356 MTERF4Q7Z6M4 381 aaKnown RBP3.68□□□□□ -1.82
CASP4-213ENST00000534356 HMGN2P46Q86SG4 172 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 GTPBP8Q8N3Z3 284 aaPredicted RBP3.68□□□□□ -1.82
CASP4-213ENST00000534356 CDC26Q8NHZ8 85 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 STAG3L4Q8TBR4 150 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 ZNF675Q8TD23 568 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 C16orf78Q8WTQ4 265 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 CIDECQ96AQ7 238 aaPredicted RBP3.68□□□□□ -1.82
CASP4-213ENST00000534356 TPD52L3Q96J77 140 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 SERPINI1Q99574 410 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 RBBP8Q99708 897 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 POTEKPQ9BYX7 375 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 POPDC3Q9HBV1 291 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 PCTPQ9UKL6 214 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 MCTS1Q9ULC4 181 aaKnown RBP3.68□□□□□ -1.82
CASP4-213ENST00000534356 CFL2Q9Y281 166 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 ACOT9Q9Y305 439 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 TMED5Q9Y3A6 229 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 ZNF780BQ9Y6R6 833 aa3.68□□□□□ -1.82
CASP4-213ENST00000534356 IGHV3-66A0A0C4DH42 116 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 GOLGA6L10A6NI86 522 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 FAM159BA6NKW6 160 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 INS-IGF2F8WCM5 200 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 MANBAO00462 879 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 SOX15O60248 233 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 SEMA3DO95025 777 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 PSMG1O95456 288 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 C1QCP02747 245 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 SERPINB1P30740 379 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 PMELP40967 661 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 FOXA1P55317 472 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 ZNF117Q03924 483 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 C2orf80Q0P641 193 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 HIKESHIQ53FT3 197 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 TIMM23BQ5SRD1 257 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 HES5Q5TA89 166 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 TTC19Q6DKK2 380 aaPredicted RBP3.67□□□□□ -1.82
CASP4-213ENST00000534356 Q6ZT83 130 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 CTAGE3PQ8IX95 158 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 PDIK1LQ8N165 341 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms