RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 SSR3Q9UNL2 185 aa16.1■□□□□ 0.17
CPSF1-209ENST00000532725 A0A0A6YYD4 124 aa16.09■□□□□ 0.17
CPSF1-209ENST00000532725 TRIM64CA6NLI5 447 aa16.09■□□□□ 0.17
CPSF1-209ENST00000532725 LDLRAD4O15165 306 aa16.09■□□□□ 0.17
CPSF1-209ENST00000532725 IL1AP01583 271 aa16.09■□□□□ 0.17
CPSF1-209ENST00000532725 HKR1P10072 659 aa16.09■□□□□ 0.17
CPSF1-209ENST00000532725 RAB3BP20337 219 aa16.09■□□□□ 0.17
CPSF1-209ENST00000532725 CHATP28329 748 aa16.09■□□□□ 0.17
CPSF1-209ENST00000532725 COMPP49747 757 aaPredicted RBP16.09■□□□□ 0.17
CPSF1-209ENST00000532725 ACTG1P63261 375 aa16.09■□□□□ 0.17
CPSF1-209ENST00000532725 AANATQ16613 207 aa16.09■□□□□ 0.17
CPSF1-209ENST00000532725 HES5Q5TA89 166 aa16.09■□□□□ 0.17
CPSF1-209ENST00000532725 NR2C2APQ86WQ0 139 aa16.09■□□□□ 0.17
CPSF1-209ENST00000532725 RFESDQ8TAC1 157 aa16.09■□□□□ 0.17
CPSF1-209ENST00000532725 CCDC107Q8WV48 283 aa16.09■□□□□ 0.17
CPSF1-209ENST00000532725 NICN1Q9BSH3 213 aa16.09■□□□□ 0.17
CPSF1-209ENST00000532725 IDI2-AS1Q9NZ38 188 aa16.09■□□□□ 0.17
CPSF1-209ENST00000532725 UBE2QL1A1L167 161 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 FAM181BA6NEQ2 426 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 IFITM5A6NNB3 132 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 C15orf65H3BRN8 121 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 CA11O75493 328 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 IGLV1-47P01700 117 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 CD36P16671 472 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 SSTR5P35346 364 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 RANBP1P43487 201 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 MINOS1Q5TGZ0 78 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 OR10A7Q8NGE5 316 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 OR4P4Q8NGL7 312 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 PIFOQ8TCI5 191 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 TAF15Q92804 592 aaKnown RBP eCLIP16.08■□□□□ 0.16
CPSF1-209ENST00000532725 NEDD4LQ96PU5 975 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 SSX3Q99909 188 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 ZNF286AQ9HBT8 521 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 MINOS1-NBL1R4GNA1 71 aa16.08■□□□□ 0.16
CPSF1-209ENST00000532725 FAM172BPA6NC97 362 aa16.07■□□□□ 0.16
CPSF1-209ENST00000532725 AIPO00170 330 aa16.07■□□□□ 0.16
CPSF1-209ENST00000532725 ORC5O43913 435 aa16.07■□□□□ 0.16
CPSF1-209ENST00000532725 GADD45AP24522 165 aa16.07■□□□□ 0.16
CPSF1-209ENST00000532725 NFYBP25208 207 aa16.07■□□□□ 0.16
CPSF1-209ENST00000532725 SSX2Q16385 188 aa16.07■□□□□ 0.16
CPSF1-209ENST00000532725 TPRA1Q86W33 373 aa16.07■□□□□ 0.16
CPSF1-209ENST00000532725 OR5R1Q8NH85 324 aa16.07■□□□□ 0.16
CPSF1-209ENST00000532725 SULT4A1Q9BR01 284 aa16.07■□□□□ 0.16
CPSF1-209ENST00000532725 CHCHD6Q9BRQ6 235 aa16.07■□□□□ 0.16
CPSF1-209ENST00000532725 URM1Q9BTM9 101 aaKnown RBP16.07■□□□□ 0.16
CPSF1-209ENST00000532725 FAAP24Q9BTP7 215 aa16.07■□□□□ 0.16
CPSF1-209ENST00000532725 TENM1Q9UKZ4 2725 aa16.07■□□□□ 0.16
CPSF1-209ENST00000532725 TMEM272A0A1B0GTI8 110 aa16.06■□□□□ 0.16
CPSF1-209ENST00000532725 FOXI3A8MTJ6 420 aaPredicted RBP16.06■□□□□ 0.16
CPSF1-209ENST00000532725 VGLL3A8MV65 326 aa16.06■□□□□ 0.16
CPSF1-209ENST00000532725 SOCS1O15524 211 aa16.06■□□□□ 0.16
CPSF1-209ENST00000532725 JUNBP17275 347 aaPredicted RBP16.06■□□□□ 0.16
CPSF1-209ENST00000532725 BLVRBP30043 206 aaPredicted RBP16.06■□□□□ 0.16
CPSF1-209ENST00000532725 TMEM50BP56557 158 aa16.06■□□□□ 0.16
CPSF1-209ENST00000532725 PLA2G7Q13093 441 aa16.06■□□□□ 0.16
CPSF1-209ENST00000532725 LRRC75BQ2VPJ9 315 aa16.06■□□□□ 0.16
CPSF1-209ENST00000532725 NKAPLQ5M9Q1 402 aa16.06■□□□□ 0.16
CPSF1-209ENST00000532725 C6orf201Q7Z4U5 140 aa16.06■□□□□ 0.16
CPSF1-209ENST00000532725 OR4K15Q8NH41 348 aa16.06■□□□□ 0.16
CPSF1-209ENST00000532725 ZNF596Q8TC21 504 aa16.06■□□□□ 0.16
CPSF1-209ENST00000532725 ARL11Q969Q4 196 aa16.06■□□□□ 0.16
CPSF1-209ENST00000532725 VPREB3Q9UKI3 123 aa16.06■□□□□ 0.16
CPSF1-209ENST00000532725 RAB22AQ9UL26 194 aa16.06■□□□□ 0.16
CPSF1-209ENST00000532725 TRAPPC2LQ9UL33 140 aa16.06■□□□□ 0.16
CPSF1-209ENST00000532725 H3BUX3 64 aa16.05■□□□□ 0.16
CPSF1-209ENST00000532725 GPR137BO60478 399 aa16.05■□□□□ 0.16
CPSF1-209ENST00000532725 RCC1P18754 421 aaPredicted RBP16.05■□□□□ 0.16
CPSF1-209ENST00000532725 HTR1DP28221 377 aa16.05■□□□□ 0.16
CPSF1-209ENST00000532725 PRRX1P54821 245 aa16.05■□□□□ 0.16
CPSF1-209ENST00000532725 SLC16A12Q6ZSM3 486 aa16.05■□□□□ 0.16
CPSF1-209ENST00000532725 MRPL30Q8TCC3 161 aaKnown RBP16.05■□□□□ 0.16
CPSF1-209ENST00000532725 KCTD7Q96MP8 289 aa16.05■□□□□ 0.16
CPSF1-209ENST00000532725 RNF167Q9H6Y7 350 aa16.05■□□□□ 0.16
CPSF1-209ENST00000532725 DPM3Q9P2X0 92 aa16.05■□□□□ 0.16
CPSF1-209ENST00000532725 BTBD17A6NE02 478 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 NOTOA8MTQ0 251 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 C12orf77C9JDV5 145 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 LY6LH3BQJ8 138 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 TOR1AO14656 332 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 SDC2P34741 201 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 RAB13P51153 203 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 LOXL3P58215 753 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 RPL15P61313 204 aaKnown RBP16.04■□□□□ 0.16
CPSF1-209ENST00000532725 RELBQ01201 579 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 FOXL1Q12952 345 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 LTC4SQ16873 150 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 HLA-DRB5Q30154 266 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 OR52M1Q8NGK5 317 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 OR9G1Q8NH87 305 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 LEAP2Q969E1 77 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 YIPF6Q96EC8 236 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 CENPOQ9BU64 300 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 LIN7BQ9HAP6 207 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 VCX3AQ9NNX9 186 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 MBNL3Q9NUK0 354 aaKnown RBP16.04■□□□□ 0.16
CPSF1-209ENST00000532725 PLEKHJ1Q9NW61 149 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 C1RLQ9NZP8 487 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 HSF4Q9ULV5 492 aa16.04■□□□□ 0.16
CPSF1-209ENST00000532725 PSG11Q9UQ72 335 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms