RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 RAB12Q6IQ22 244 aa8.74□□□□□ -1.01
GPATCH4-216ENST00000531900 LIAT1Q6ZQX7 453 aa8.74□□□□□ -1.01
GPATCH4-216ENST00000531900 LHFPL4Q7Z7J7 247 aa8.74□□□□□ -1.01
GPATCH4-216ENST00000531900 DYNAPQ8N1N2 210 aa8.74□□□□□ -1.01
GPATCH4-216ENST00000531900 ABHD12Q8N2K0 398 aa8.74□□□□□ -1.01
GPATCH4-216ENST00000531900 C8orf31Q8N9H6 132 aa8.74□□□□□ -1.01
GPATCH4-216ENST00000531900 SSX3Q99909 188 aa8.74□□□□□ -1.01
GPATCH4-216ENST00000531900 BANF2Q9H503 90 aa8.74□□□□□ -1.01
GPATCH4-216ENST00000531900 CALYQ9NYX4 217 aa8.74□□□□□ -1.01
GPATCH4-216ENST00000531900 V9GY05 133 aa8.74□□□□□ -1.01
GPATCH4-216ENST00000531900 SHISA3A0PJX4 238 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 BTBD17A6NE02 478 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 FOXI3A8MTJ6 420 aaPredicted RBP8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 OOSP1A8MZH6 123 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 LY6LH3BQJ8 138 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 C15orf65H3BRN8 121 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 H3BUX3 64 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 F2RL2O00254 374 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 HSPB6O14558 160 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 RRP9O43818 475 aaKnown RBP8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 PDCD6O75340 191 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 ARSBP15848 533 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 HTR1DP28221 377 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 CHATP28329 748 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 TMEM30BQ3MIR4 351 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 PRR31Q5SQ13 230 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 PRAMEF5Q5TYX0 476 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 OR4F5Q8NH21 305 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 OR9G1Q8NH87 305 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 TMEM59Q9BXS4 323 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 C16orf95Q9H693 158 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 BEX1Q9HBH7 125 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 ZNF286AQ9HBT8 521 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 TNFRSF19Q9NS68 423 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 MBNL3Q9NUK0 354 aaKnown RBP8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 IDI2-AS1Q9NZ38 188 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 DPM3Q9P2X0 92 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 AK6Q9Y3D8 172 aaKnown RBP8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 PEX16Q9Y5Y5 336 aa8.73□□□□□ -1.01
GPATCH4-216ENST00000531900 WNK1Q9H4A3 2382 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 TRIM64CA6NLI5 447 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 LEUTXA8MZ59 168 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 BUB1B-PAK6H3BSN5 160 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 PDCD5O14737 125 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 MPIG6BO95866 241 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 MDKP21741 143 aaPredicted RBP8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 OMGP23515 440 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 GLP1RP43220 463 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 PRRX1P54821 245 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 LOXL3P58215 753 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 SSX2Q16385 188 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 HLA-DRB5Q30154 266 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 OR10K2Q6IF99 312 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 TRAT1Q6PIZ9 186 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 BRICD5Q6PL45 260 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 BAIAP2L2Q6UXY1 529 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 LINC00311Q8N616 119 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 DTX3Q8N9I9 347 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 MRGPRDQ8TDS7 321 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 FAM46BQ96A09 425 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 PTX4Q96A99 478 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 LPAR5Q9H1C0 372 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 MMP28Q9H239 520 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 RAB18Q9NP72 206 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 RAB9BQ9NP90 201 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 TXNL4BQ9NX01 149 aaKnown RBP8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 ETAA1Q9NY74 926 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 HSF4Q9ULV5 492 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 STUB1Q9UNE7 303 aa8.72□□□□□ -1.01
GPATCH4-216ENST00000531900 TRBV6-6A0A0A6YYG2 114 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 CLPSL1A2RUU4 121 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 IFITM5A6NNB3 132 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 J3QR06 171 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 AIPO00170 330 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 NAPSAO96009 420 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 PSMB9P28065 219 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 SSTR5P35346 364 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 CEACAM3P40198 252 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 KIR2DS4P43632 304 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 RAG2P55895 527 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 DYNC1I2Q13409 638 aaKnown RBP8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 RAB11BQ15907 218 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 C2orf76Q3KRA6 126 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 LY6G6FQ5SQ64 297 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 UTF1Q5T230 341 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 C6orf183Q5T699 404 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 STEAP3Q658P3 488 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 Q6ZSV7 163 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 TPRA1Q86W33 373 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 LINC01006Q8NI28 216 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 NEK7Q8TDX7 302 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 FAM3DQ96BQ1 224 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 URM1Q9BTM9 101 aaKnown RBP8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 RIMS4Q9H426 269 aaPredicted RBP8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 RANBP3Q9H6Z4 567 aaPredicted RBP8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 PLGRKTQ9HBL7 147 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 ING3Q9NXR8 418 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 STEAP1Q9UHE8 339 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 PITPNC1Q9UKF7 332 aa8.71□□□□□ -1.02
GPATCH4-216ENST00000531900 PSG11Q9UQ72 335 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms