RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ENDOGQ14249 297 aaKnown RBP1.61□□□□□ -2.15
CD44-234ENST00000531873 LRRC26Q2I0M4 334 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 TTMPQ5BVD1 217 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 IGFL1Q6UW32 110 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 DRAM2Q6UX65 266 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 IGFL3Q6UXB1 125 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 OLIG3Q7RTU3 272 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 MTERF4Q7Z6M4 381 aaKnown RBP1.61□□□□□ -2.15
CD44-234ENST00000531873 AMN1Q8IY45 258 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 OR11L1Q8NGX0 322 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 RBPMSQ93062 196 aaKnown RBP1.61□□□□□ -2.15
CD44-234ENST00000531873 YIPF5Q969M3 257 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 REEP6Q96HR9 211 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 SHANK2-AS3Q9BTD1 123 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 LCE3DQ9BYE3 92 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 HDHD2Q9H0R4 259 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 TXNIPQ9H3M7 391 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 COMMD9Q9P000 198 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 ZNF230Q9UIE0 474 aaPredicted RBP1.61□□□□□ -2.15
CD44-234ENST00000531873 DOCK6Q96HP0 2047 aa1.61□□□□□ -2.15
CD44-234ENST00000531873 SYNJ1O43426 1573 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 LCTP09848 1927 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 BLMP54132 1417 aaPredicted RBP1.6□□□□□ -2.15
CD44-234ENST00000531873 LRP5O75197 1615 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 DNMT1P26358 1616 aaKnown RBP1.6□□□□□ -2.15
CD44-234ENST00000531873 SMARCA4P51532 1647 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 GOLGA6L4A6NEF3 574 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 ZNF729A6NN14 1252 aaPredicted RBP1.6□□□□□ -2.15
CD44-234ENST00000531873 A8MWP4 228 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 SLC31A1O15431 190 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 PSIP1O75475 530 aaKnown RBP1.6□□□□□ -2.15
CD44-234ENST00000531873 POP7O75817 140 aaKnown RBP1.6□□□□□ -2.15
CD44-234ENST00000531873 INAFM2P0DMQ5 153 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 PTHLHP12272 177 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 GABRA1P14867 456 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 ATF1P18846 271 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 S100A2P29034 98 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 EVI2BP34910 448 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 COILP38432 576 aaPredicted RBP1.6□□□□□ -2.15
CD44-234ENST00000531873 NUDT2P50583 147 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 MP68P56378 58 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 RAB2AP61019 212 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 TBC1D28Q2M2D7 210 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 LDLRAD2Q5SZI1 272 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 SDHAF4Q5VUM1 108 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 SGPP2Q8IWX5 399 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 ZNF561Q8N587 486 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 C2orf73Q8N5S3 287 aaPredicted RBP1.6□□□□□ -2.15
CD44-234ENST00000531873 OR4P4Q8NGL7 312 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 CASTOR1Q8WTX7 329 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 CLDN23Q96B33 292 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 PPWD1Q96BP3 646 aaKnown RBP1.6□□□□□ -2.15
CD44-234ENST00000531873 MBOAT7Q96N66 472 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 B9D2Q9BPU9 175 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 UGT2B28Q9BY64 529 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 CHST5Q9GZS9 411 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 TRIM45Q9H8W5 580 aaPredicted RBP1.6□□□□□ -2.15
CD44-234ENST00000531873 INIPQ9NRY2 104 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 ZNF492Q9P255 531 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 PLB1Q6P1J6 1458 aa1.6□□□□□ -2.15
CD44-234ENST00000531873 KDM5CP41229 1560 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 ZNF407Q9C0G0 2248 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 MYO5BQ9ULV0 1848 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 ATG2BQ96BY7 2078 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 CFAP43Q8NDM7 1665 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 VGLL3A8MV65 326 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 GOLGA8KD6RF30 607 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 GOLGA8MH3BSY2 632 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 RTL8CO15255 209 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 IGKV1D-33P01593 117 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 IGKV1-33P01594 117 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 HLA-AP01891 365 aaKnown RBP1.59□□□□□ -2.15
CD44-234ENST00000531873 PFN1P07737 140 aaKnown RBP1.59□□□□□ -2.15
CD44-234ENST00000531873 HLA-DMAP28067 261 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 CD34P28906 385 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 ACTR1BP42025 376 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 CBX5P45973 191 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 CASP8Q14790 479 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 IGFBP7Q16270 282 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 CENPWQ5EE01 88 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 FAM151BQ6UXP7 276 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 PLCZ1Q86YW0 608 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 TMEM156Q8N614 296 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 OR1P1Q8NH06 330 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 OR4A5Q8NH83 315 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 ZNRF2Q8NHG8 242 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 STOML3Q8TAV4 291 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 RBP7Q96R05 134 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 DCUN1D5Q9BTE7 237 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 PLEKHJ1Q9NW61 149 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 PSMD13Q9UNM6 376 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 TP53TG1Q9Y2A0 90 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 MTCH2Q9Y6C9 303 aa1.59□□□□□ -2.15
CD44-234ENST00000531873 MAPKBP1O60336 1514 aa1.59□□□□□ -2.16
CD44-234ENST00000531873 ARAP3Q8WWN8 1544 aa1.59□□□□□ -2.16
CD44-234ENST00000531873 A0A0C4DFX4 3053 aa1.59□□□□□ -2.16
CD44-234ENST00000531873 DIP2BQ9P265 1576 aa1.59□□□□□ -2.16
CD44-234ENST00000531873 ATAD5Q96QE3 1844 aa1.59□□□□□ -2.16
CD44-234ENST00000531873 CACNA1SQ13698 1873 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 NLRC5Q86WI3 1866 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms