RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 CPEP16870 476 aa12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 PSMA1P25786 263 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 GABRA5P31644 462 aa12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 RAB13P51153 203 aa12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 SRSF4Q08170 494 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 RBM39Q14498 530 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 INSL4Q14641 139 aa12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 TBCEQ15813 527 aaPredicted RBP12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 Q3ZCU0 254 aa12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 FAM27D1Q5T7N8 215 aa12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 TMED9Q9BVK6 235 aa12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 MMP28Q9H239 520 aa12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 ING3Q9NXR8 418 aa12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 BLOC1S6Q9UL45 172 aa12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 TET2Q6N021 2002 aaPredicted RBP12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 VWFP04275 2813 aa12.42□□□□□ -0.42
CCDC90B-215ENST00000529745 C15orf65H3BRN8 121 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 J3QR06 171 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 F2RL2O00254 374 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 TOR1AO14656 332 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 MRPS14O60783 128 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 MT-ND4P03905 459 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 SRMP19623 302 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 BRS3P32247 399 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 VHLP40337 213 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 ARHGDIBP52566 201 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 TMEM30BQ3MIR4 351 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 HSD17B12Q53GQ0 312 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 PLA1AQ53H76 456 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 ATAD3CQ5T2N8 411 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 TPTE2P1Q5T6R2 138 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 LIPKQ5VXJ0 399 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 GLT8D1Q68CQ7 371 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 TMEM91Q6ZNR0 172 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 C8orf31Q8N9H6 132 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 TMEM104Q8NE00 496 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 OR2T6Q8NHC8 308 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 MRGPRDQ8TDS7 321 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 CST11Q9H112 138 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 ZNF702PQ9H963 129 aa12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 AMMECR1Q9Y4X0 333 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-215ENST00000529745 MCRIP1C9JLW8 97 aa12.4□□□□□ -0.42
CCDC90B-215ENST00000529745 SSTR5P35346 364 aa12.4□□□□□ -0.42
CCDC90B-215ENST00000529745 UTF1Q5T230 341 aa12.4□□□□□ -0.42
CCDC90B-215ENST00000529745 SIGIRRQ6IA17 410 aa12.4□□□□□ -0.42
CCDC90B-215ENST00000529745 CCDC144NLQ6NUI1 221 aa12.4□□□□□ -0.42
CCDC90B-215ENST00000529745 TREML4Q6UXN2 200 aa12.4□□□□□ -0.42
CCDC90B-215ENST00000529745 CEACAM19Q7Z692 300 aa12.4□□□□□ -0.42
CCDC90B-215ENST00000529745 CNBD2Q96M20 576 aa12.4□□□□□ -0.42
CCDC90B-215ENST00000529745 MGLLQ99685 303 aa12.4□□□□□ -0.42
CCDC90B-215ENST00000529745 SELENOIQ9C0D9 397 aa12.4□□□□□ -0.42
CCDC90B-215ENST00000529745 LIN7BQ9HAP6 207 aa12.4□□□□□ -0.42
CCDC90B-215ENST00000529745 PSG11Q9UQ72 335 aa12.4□□□□□ -0.42
CCDC90B-215ENST00000529745 FAM172BPA6NC97 362 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 FAM90A9PA6NNJ1 464 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 SLC22A1O15245 554 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 CRTAPO75718 401 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 ARL6IP5O75915 188 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 JUNBP17275 347 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 FUT3P21217 361 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 NFYBP25208 207 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 GABARAPL2P60520 117 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 RAB12Q6IQ22 244 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 TRAT1Q6PIZ9 186 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 ZNF554Q86TJ5 538 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 LINC00311Q8N616 119 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 WIPF2Q8TF74 440 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 CFHR4Q92496 578 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 TM2D1Q9BX74 207 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 PRSS22Q9GZN4 317 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 BANF2Q9H503 90 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 RAB9BQ9NP90 201 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 SERTAD4Q9NUC0 356 aa12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 MBNL3Q9NUK0 354 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-215ENST00000529745 TMEM14DPA8MWL7 114 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 M0QZ24 198 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 AIPO00170 330 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 PDCD6O75340 191 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 VSIG8P0DPA2 414 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 MNDAP41218 407 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 LOXL3P58215 753 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 RPS25P62851 125 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 QRFPP83859 136 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 HERPUD1Q15011 391 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 ZNF367Q7RTV3 350 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 TMEM219Q86XT9 240 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 THNSL2Q86YJ6 484 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 OR6M1Q8NGM8 313 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 RFESDQ8TAC1 157 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 NEK7Q8TDX7 302 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 ARL11Q969Q4 196 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 CCDC90BQ9GZT6 254 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 GFOD1Q9NXC2 390 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 ETAA1Q9NY74 926 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 PEX16Q9Y5Y5 336 aa12.38□□□□□ -0.43
CCDC90B-215ENST00000529745 SLC17A2O00624 439 aa12.37□□□□□ -0.43
CCDC90B-215ENST00000529745 DENRO43583 198 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-215ENST00000529745 OR2F2O95006 317 aa12.37□□□□□ -0.43
CCDC90B-215ENST00000529745 BPNT1O95861 308 aa12.37□□□□□ -0.43
CCDC90B-215ENST00000529745 HSMCR30P0CW71 290 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms