RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 KLHDC1Q8N7A1 406 aa11.5□□□□□ -0.57
CAPN1-216ENST00000528739 OR4K15Q8NH41 348 aa11.5□□□□□ -0.57
CAPN1-216ENST00000528739 AKR1E2Q96JD6 320 aa11.5□□□□□ -0.57
CAPN1-216ENST00000528739 CST11Q9H112 138 aa11.5□□□□□ -0.57
CAPN1-216ENST00000528739 DUSP21Q9H596 190 aa11.5□□□□□ -0.57
CAPN1-216ENST00000528739 IFT22Q9H7X7 185 aa11.5□□□□□ -0.57
CAPN1-216ENST00000528739 GHRLQ9UBU3 117 aa11.5□□□□□ -0.57
CAPN1-216ENST00000528739 PSG11Q9UQ72 335 aa11.5□□□□□ -0.57
CAPN1-216ENST00000528739 LSM2Q9Y333 95 aaKnown RBP11.5□□□□□ -0.57
CAPN1-216ENST00000528739 IGHV3-43A0A0B4J1X8 118 aa11.49□□□□□ -0.57
CAPN1-216ENST00000528739 IGLV1-47P01700 117 aa11.49□□□□□ -0.57
CAPN1-216ENST00000528739 CGB3P0DN86 165 aa11.49□□□□□ -0.57
CAPN1-216ENST00000528739 CGB7P0DN87 165 aa11.49□□□□□ -0.57
CAPN1-216ENST00000528739 IGHV3-43DP0DP04 118 aa11.49□□□□□ -0.57
CAPN1-216ENST00000528739 CRHBPP24387 322 aa11.49□□□□□ -0.57
CAPN1-216ENST00000528739 RPS25P62851 125 aaKnown RBP11.49□□□□□ -0.57
CAPN1-216ENST00000528739 HES1Q14469 280 aa11.49□□□□□ -0.57
CAPN1-216ENST00000528739 IRF3Q14653 427 aa11.49□□□□□ -0.57
CAPN1-216ENST00000528739 HERPUD1Q15011 391 aa11.49□□□□□ -0.57
CAPN1-216ENST00000528739 UTF1Q5T230 341 aa11.49□□□□□ -0.57
CAPN1-216ENST00000528739 SYT6Q5T7P8 510 aaPredicted RBP11.49□□□□□ -0.57
CAPN1-216ENST00000528739 C11orf88Q6PI97 169 aa11.49□□□□□ -0.57
CAPN1-216ENST00000528739 PRSS48Q7RTY5 328 aa11.49□□□□□ -0.57
CAPN1-216ENST00000528739 TMEM104Q8NE00 496 aa11.49□□□□□ -0.57
CAPN1-216ENST00000528739 NEDD4LQ96PU5 975 aa11.49□□□□□ -0.57
CAPN1-216ENST00000528739 PLGRKTQ9HBL7 147 aa11.49□□□□□ -0.57
CAPN1-216ENST00000528739 A0A087X0M5 115 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 A0A1B0GX30 115 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 NPIPB11E5RHQ5 1161 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 SPINT2O43291 252 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 MT-ND4P03905 459 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 UBBP0CG47 229 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 FUT3P21217 361 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 VDAC2P45880 294 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-216ENST00000528739 EFNB2P52799 333 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 BLCAPP62952 87 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 MADCAM1Q13477 382 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 TRAM1Q15629 374 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 C9orf152Q5JTZ5 239 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 HIST2H2BDQ6DRA6 164 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 OR10K2Q6IF99 312 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 ZNF497Q6ZNH5 498 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 LRRTM1Q86UE6 522 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 OR10A7Q8NGE5 316 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 FAM110DQ8TAY7 271 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-216ENST00000528739 PHYHIPQ92561 330 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 MGLLQ99685 303 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 SLC25A33Q9BSK2 321 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 Q9H521 79 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 ZNF702PQ9H963 129 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 RAB9BQ9NP90 201 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 KCNIP1Q9NZI2 227 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 RAB26Q9ULW5 256 aa11.48□□□□□ -0.57
CAPN1-216ENST00000528739 FBN3Q75N90 2809 aa11.47□□□□□ -0.57
CAPN1-216ENST00000528739 ARL6IP5O75915 188 aa11.47□□□□□ -0.57
CAPN1-216ENST00000528739 CSF1P09603 554 aa11.47□□□□□ -0.57
CAPN1-216ENST00000528739 FAM106CPP0CH98 169 aa11.47□□□□□ -0.57
CAPN1-216ENST00000528739 HTR2CP28335 458 aa11.47□□□□□ -0.57
CAPN1-216ENST00000528739 PAX5Q02548 391 aa11.47□□□□□ -0.57
CAPN1-216ENST00000528739 MLLT11Q13015 90 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-216ENST00000528739 C2orf68Q2NKX9 166 aa11.47□□□□□ -0.57
CAPN1-216ENST00000528739 C6orf183Q5T699 404 aa11.47□□□□□ -0.57
CAPN1-216ENST00000528739 Q96M66 194 aa11.47□□□□□ -0.57
CAPN1-216ENST00000528739 TMEM59Q9BXS4 323 aa11.47□□□□□ -0.57
CAPN1-216ENST00000528739 ISYNA1Q9NPH2 558 aa11.47□□□□□ -0.57
CAPN1-216ENST00000528739 GNG12Q9UBI6 72 aa11.47□□□□□ -0.57
CAPN1-216ENST00000528739 AK6Q9Y3D8 172 aaKnown RBP11.47□□□□□ -0.57
CAPN1-216ENST00000528739 FAM90A10PA6NDY2 464 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 FAM90A18PA6NE21 464 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 FAM90A16PA6NEW6 464 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 FAM90A20PA6NIJ5 464 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 FAM90A7PA6NKC0 464 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 FAM90A22PA8MWA6 464 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 FAM90A12PA8MX19 464 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 FAM90A5PA8MXJ8 464 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 FAM90A23PA8MXZ1 464 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 OOSP1A8MZH6 123 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 ORC5O43913 435 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 PDCD6O75340 191 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 UCHL1P09936 223 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 FAM90A15PP0C7V4 464 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 FAM90A13PP0C7W8 464 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 FAM90A14PP0C7W9 464 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 FAM90A24PP0C7X0 464 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 CPEP16870 476 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 PSMA1P25786 263 aaKnown RBP11.46□□□□□ -0.57
CAPN1-216ENST00000528739 IL3RAP26951 378 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 CALRP27797 417 aaKnown RBP11.46□□□□□ -0.57
CAPN1-216ENST00000528739 REG1BP48304 166 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 GP2P55259 537 aaKnown RBP11.46□□□□□ -0.57
CAPN1-216ENST00000528739 TPBGQ13641 420 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 HNF4GQ14541 408 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 P2RY14Q15391 338 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 ABCA11PQ4W5N1 156 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 KIAA2026Q5HYC2 2103 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 SLC16A12Q6ZSM3 486 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 C16orf82Q7Z2V1 217 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 MOB3BQ86TA1 216 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 OR10V1Q8NGI7 309 aa11.46□□□□□ -0.57
CAPN1-216ENST00000528739 OR56B4Q8NH76 319 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms