RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 CITED1Q99966 193 aa7.33□□□□□ -1.24
CMTM1-210ENST00000528441 SLC25A33Q9BSK2 321 aa7.33□□□□□ -1.24
CMTM1-210ENST00000528441 MMP28Q9H239 520 aa7.33□□□□□ -1.24
CMTM1-210ENST00000528441 MMP27Q9H306 513 aa7.33□□□□□ -1.24
CMTM1-210ENST00000528441 PLGRKTQ9HBL7 147 aa7.33□□□□□ -1.24
CMTM1-210ENST00000528441 PLCXD1Q9NUJ7 323 aa7.33□□□□□ -1.24
CMTM1-210ENST00000528441 KCNIP1Q9NZI2 227 aa7.33□□□□□ -1.24
CMTM1-210ENST00000528441 NDUFA13Q9P0J0 144 aa7.33□□□□□ -1.24
CMTM1-210ENST00000528441 GNG12Q9UBI6 72 aa7.33□□□□□ -1.24
CMTM1-210ENST00000528441 FBLN5Q9UBX5 448 aa7.33□□□□□ -1.24
CMTM1-210ENST00000528441 SCOCQ9UIL1 159 aa7.33□□□□□ -1.24
CMTM1-210ENST00000528441 BLOC1S6Q9UL45 172 aa7.33□□□□□ -1.24
CMTM1-210ENST00000528441 PEX16Q9Y5Y5 336 aa7.33□□□□□ -1.24
CMTM1-210ENST00000528441 IGHV3-43A0A0B4J1X8 118 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 A0A1W2PPE3 182 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 UBE2QL1A1L167 161 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 A6NDX4 124 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 SPINT2O43291 252 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 FAM106CPP0CH98 169 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 IGHV3-43DP0DP04 118 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 MGMTP16455 207 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 IGFBP3P17936 291 aaPredicted RBP7.32□□□□□ -1.24
CMTM1-210ENST00000528441 GDNFP39905 211 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 KIR2DS4P43632 304 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 BDH1Q02338 343 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 MADCAM1Q13477 382 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 HABP2Q14520 560 aaPredicted RBP7.32□□□□□ -1.24
CMTM1-210ENST00000528441 C17orf58Q2M2W7 97 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 C6orf183Q5T699 404 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 TPTE2P1Q5T6R2 138 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 RSBN1Q5VWQ0 802 aaPredicted RBP7.32□□□□□ -1.24
CMTM1-210ENST00000528441 LIPKQ5VXJ0 399 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 RAB12Q6IQ22 244 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 MOB3BQ86TA1 216 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 LYG1Q8N1E2 194 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 OR4K15Q8NH41 348 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 CORO2AQ92828 525 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 TMEM203Q969S6 136 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 KIRREL1Q96J84 757 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 NEDD4LQ96PU5 975 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 IL36GQ9NZH8 169 aa7.32□□□□□ -1.24
CMTM1-210ENST00000528441 TRBV5-7A0A0A0MS05 114 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 A0A1W2PRX2 142 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 FAM90A8PA6NJQ4 464 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 VGLL3A8MV65 326 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 BUB1B-PAK6H3BSN5 160 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 TNFAIP8O95379 198 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 TMEM11P17152 192 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 HNF4GQ14541 408 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 TMEM95Q3KNT9 176 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 ABCA11PQ4W5N1 156 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 SYT6Q5T7P8 510 aaPredicted RBP7.31□□□□□ -1.24
CMTM1-210ENST00000528441 HIST2H2BDQ6DRA6 164 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 ZNF529Q6P280 563 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 C16orf82Q7Z2V1 217 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 CENPVQ7Z7K6 275 aaPredicted RBP7.31□□□□□ -1.24
CMTM1-210ENST00000528441 OR10V1Q8NGI7 309 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 OR56B4Q8NH76 319 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 MRPS24Q96EL2 167 aaKnown RBP7.31□□□□□ -1.24
CMTM1-210ENST00000528441 UQCC2Q9BRT2 126 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 TMEM59Q9BXS4 323 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 FBN3Q75N90 2809 aa7.31□□□□□ -1.24
CMTM1-210ENST00000528441 SH2D7A6NKC9 451 aaPredicted RBP7.3□□□□□ -1.24
CMTM1-210ENST00000528441 OOSP1A8MZH6 123 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 J3QR06 171 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 CCRL2O00421 344 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 HSD17B6O14756 317 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 ARL6IP5O75915 188 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 TSPAN15O95858 294 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 SNRNP70P08621 437 aaKnown RBP7.3□□□□□ -1.24
CMTM1-210ENST00000528441 UBBP0CG47 229 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 PF4V1P10720 104 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 GZMHP20718 246 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 REG1BP48304 166 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 EFNB2P52799 333 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 KRTAP10-3P60369 221 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 RPS11P62280 158 aaKnown RBP eCLIP7.3□□□□□ -1.24
CMTM1-210ENST00000528441 MRPS15P82914 257 aaKnown RBP7.3□□□□□ -1.24
CMTM1-210ENST00000528441 DEFA6Q01524 100 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 INSL4Q14641 139 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 TRAM1Q15629 374 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 KCTD21Q4G0X4 260 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 NHLRC3Q5JS37 347 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 FAM27D1Q5T7N8 215 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 LAIR2Q6ISS4 152 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 TRAT1Q6PIZ9 186 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 CRIP3Q6Q6R5 217 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 CCBE1Q6UXH8 406 aaPredicted RBP7.3□□□□□ -1.24
CMTM1-210ENST00000528441 FBLIM1Q8WUP2 373 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 AJUBAQ96IF1 538 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 ZNF702PQ9H963 129 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 ZNF581Q9P0T4 197 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 GHRLQ9UBU3 117 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 PSG11Q9UQ72 335 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 MOB4Q9Y3A3 225 aa7.3□□□□□ -1.24
CMTM1-210ENST00000528441 IGHV3-72A0A0B4J1Y9 119 aa7.29□□□□□ -1.24
CMTM1-210ENST00000528441 NCBP2LA6PVI3 153 aaKnown RBP7.29□□□□□ -1.24
CMTM1-210ENST00000528441 M0QZK8 103 aa7.29□□□□□ -1.24
CMTM1-210ENST00000528441 PIN1P1O15428 100 aa7.29□□□□□ -1.24
CMTM1-210ENST00000528441 MRPS14O60783 128 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms