RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 KBTBD11-OT1A0A1B0GTJ5 212 aa11.39□□□□□ -0.59
CAPN1-212ENST00000527887 MMP23AO75900 390 aa11.39□□□□□ -0.59
CAPN1-212ENST00000527887 ARL6IP5O75915 188 aa11.39□□□□□ -0.59
CAPN1-212ENST00000527887 ZNF182P17025 639 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-212ENST00000527887 VDAC2P45880 294 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-212ENST00000527887 NCS1P62166 190 aa11.39□□□□□ -0.59
CAPN1-212ENST00000527887 BLCAPP62952 87 aa11.39□□□□□ -0.59
CAPN1-212ENST00000527887 FABP5Q01469 135 aa11.39□□□□□ -0.59
CAPN1-212ENST00000527887 IL13RA2Q14627 380 aa11.39□□□□□ -0.59
CAPN1-212ENST00000527887 ARSJQ5FYB0 599 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-212ENST00000527887 UNQ9370/PRO34162Q6UXP9 181 aa11.39□□□□□ -0.59
CAPN1-212ENST00000527887 C11orf44Q8N8P7 122 aa11.39□□□□□ -0.59
CAPN1-212ENST00000527887 TSEN15Q8WW01 171 aaKnown RBP11.39□□□□□ -0.59
CAPN1-212ENST00000527887 PDCD1LG2Q9BQ51 273 aa11.39□□□□□ -0.59
CAPN1-212ENST00000527887 CENPOQ9BU64 300 aa11.39□□□□□ -0.59
CAPN1-212ENST00000527887 LINC00574Q9H8X3 128 aa11.39□□□□□ -0.59
CAPN1-212ENST00000527887 ZNF281Q9Y2X9 895 aa11.39□□□□□ -0.59
CAPN1-212ENST00000527887 PRKDCP78527 4128 aaKnown RBP11.38□□□□□ -0.59
CAPN1-212ENST00000527887 TRAV1-2A0A0B4J238 106 aa11.38□□□□□ -0.59
CAPN1-212ENST00000527887 BUB1B-PAK6H3BSN5 160 aa11.38□□□□□ -0.59
CAPN1-212ENST00000527887 M0QZK8 103 aa11.38□□□□□ -0.59
CAPN1-212ENST00000527887 GABRPO00591 440 aa11.38□□□□□ -0.59
CAPN1-212ENST00000527887 MAPK3P27361 379 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-212ENST00000527887 SOX6P35712 828 aa11.38□□□□□ -0.59
CAPN1-212ENST00000527887 MNDAP41218 407 aa11.38□□□□□ -0.59
CAPN1-212ENST00000527887 RPS25P62851 125 aaKnown RBP11.38□□□□□ -0.59
CAPN1-212ENST00000527887 HABP2Q14520 560 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-212ENST00000527887 HLA-DRB5Q30154 266 aa11.38□□□□□ -0.59
CAPN1-212ENST00000527887 KPRPQ5T749 579 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-212ENST00000527887 PRAMEF5Q5TYX0 476 aa11.38□□□□□ -0.59
CAPN1-212ENST00000527887 ASCL4Q6XD76 172 aa11.38□□□□□ -0.59
CAPN1-212ENST00000527887 CROCCP3Q8IVE0 287 aa11.38□□□□□ -0.59
CAPN1-212ENST00000527887 OR10A7Q8NGE5 316 aa11.38□□□□□ -0.59
CAPN1-212ENST00000527887 OR9G1Q8NH87 305 aa11.38□□□□□ -0.59
CAPN1-212ENST00000527887 COQ2Q96H96 371 aa11.38□□□□□ -0.59
CAPN1-212ENST00000527887 GPER1Q99527 375 aa11.38□□□□□ -0.59
CAPN1-212ENST00000527887 OCSTAMPQ9BR26 566 aa11.38□□□□□ -0.59
CAPN1-212ENST00000527887 TET2Q6N021 2002 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-212ENST00000527887 OR2F2O95006 317 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 CGB3P0DN86 165 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 CGB7P0DN87 165 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 CD28P10747 220 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 LSM3P62310 102 aaKnown RBP11.37□□□□□ -0.59
CAPN1-212ENST00000527887 RSU1Q15404 277 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 C17orf58Q2M2W7 97 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 ACSM3Q53FZ2 586 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 PAN3Q58A45 887 aaKnown RBP11.37□□□□□ -0.59
CAPN1-212ENST00000527887 NHLRC3Q5JS37 347 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 TPTE2P1Q5T6R2 138 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 SAMD5Q5TGI4 173 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 TMEM91Q6ZNR0 172 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 RNF144BQ7Z419 303 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 REC114Q7Z4M0 266 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 THNSL2Q86YJ6 484 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 TNFAIP8L1Q8WVP5 186 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 TMEM203Q969S6 136 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 RBM14Q96PK6 669 aaKnown RBP11.37□□□□□ -0.59
CAPN1-212ENST00000527887 TMED9Q9BVK6 235 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 SLIRPQ9GZT3 109 aaKnown RBP11.37□□□□□ -0.59
CAPN1-212ENST00000527887 NXF2Q9GZY0 626 aaKnown RBP11.37□□□□□ -0.59
CAPN1-212ENST00000527887 IFT22Q9H7X7 185 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 TMEM138Q9NPI0 162 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 IL36GQ9NZH8 169 aa11.37□□□□□ -0.59
CAPN1-212ENST00000527887 AMMECR1Q9Y4X0 333 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-212ENST00000527887 A0A075B6Q4 140 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 LY6LH3BQJ8 138 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 ZNF780AO75290 641 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-212ENST00000527887 UCHL1P09936 223 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 FAM106CPP0CH98 169 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 RORCP51449 518 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 RPS11P62280 158 aaKnown RBP eCLIP11.36□□□□□ -0.59
CAPN1-212ENST00000527887 PPP3R1P63098 170 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 ATXN7L3Q14CW9 347 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-212ENST00000527887 BEAN1Q3B7T3 259 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 NSUN5P1Q3KNT7 163 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 C22orf42Q6IC83 251 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 LINC00596Q86U02 117 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 C1QL4Q86Z23 238 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 ZFP41Q8N8Y5 198 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 TMEM106AQ96A25 262 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 R3HDM4Q96D70 268 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 KIRREL1Q96J84 757 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 DCUN1D5Q9BTE7 237 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 METTL9Q9H1A3 318 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 MMP28Q9H239 520 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 ZNF286AQ9HBT8 521 aa11.36□□□□□ -0.59
CAPN1-212ENST00000527887 MEIKINA0A087WXM9 373 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 TRAV24A0A0B4J272 114 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 TRBV5-5A0A0J9YX44 114 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 PNMA8CA0A1B0GUJ8 204 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 NPIPB11E5RHQ5 1161 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 G3V4G9 280 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 GZMHP20718 246 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 RPS19P39019 145 aaKnown RBP11.35□□□□□ -0.59
CAPN1-212ENST00000527887 SOX2P48431 317 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 CD83Q01151 205 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 BAIAP2L2Q6UXY1 529 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 CEACAM19Q7Z692 300 aa11.35□□□□□ -0.59
CAPN1-212ENST00000527887 CENPVQ7Z7K6 275 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-212ENST00000527887 OR5AU1Q8NGC0 362 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms