RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 EWSR1Q01844 656 aaKnown RBP eCLIP13.04□□□□□ -0.32
USH1C-207ENST00000527720 ZNF146Q15072 292 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 CLRN3Q8NCR9 226 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 SLC25A40Q8TBP6 338 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 SLC25A31Q9H0C2 315 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 TLNRD1Q9H1K6 362 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 LUZP4Q9P127 313 aa13.04□□□□□ -0.32
USH1C-207ENST00000527720 PURGQ9UJV8 347 aaKnown RBP13.04□□□□□ -0.32
USH1C-207ENST00000527720 STRAPQ9Y3F4 350 aaKnown RBP13.04□□□□□ -0.32
USH1C-207ENST00000527720 PTPRBP23467 1997 aa13.03□□□□□ -0.32
USH1C-207ENST00000527720 CACNA1GO43497 2377 aa13.03□□□□□ -0.32
USH1C-207ENST00000527720 RNASEK-C17orf49H0YIS7 233 aa13.03□□□□□ -0.32
USH1C-207ENST00000527720 ADAM20O43506 726 aa13.03□□□□□ -0.32
USH1C-207ENST00000527720 SLC25A6P12236 298 aa13.03□□□□□ -0.32
USH1C-207ENST00000527720 CBR1P16152 277 aa13.03□□□□□ -0.32
USH1C-207ENST00000527720 TUBG1P23258 451 aa13.03□□□□□ -0.32
USH1C-207ENST00000527720 DVL1P1P54792 670 aaPredicted RBP13.03□□□□□ -0.32
USH1C-207ENST00000527720 ID3Q02535 119 aa13.03□□□□□ -0.32
USH1C-207ENST00000527720 NHLH2Q02577 135 aa13.03□□□□□ -0.32
USH1C-207ENST00000527720 ZNF266Q14584 549 aa13.03□□□□□ -0.32
USH1C-207ENST00000527720 ZNF169Q14929 603 aaPredicted RBP13.03□□□□□ -0.32
USH1C-207ENST00000527720 GUCA2BQ16661 112 aa13.03□□□□□ -0.32
USH1C-207ENST00000527720 ZNF497Q6ZNH5 498 aa13.03□□□□□ -0.32
USH1C-207ENST00000527720 SARAFQ96BY9 339 aa13.03□□□□□ -0.32
USH1C-207ENST00000527720 PLEKHF2Q9H8W4 249 aa13.03□□□□□ -0.32
USH1C-207ENST00000527720 TUBG2Q9NRH3 451 aa13.03□□□□□ -0.32
USH1C-207ENST00000527720 LYRM2Q9NU23 88 aaPredicted RBP13.03□□□□□ -0.32
USH1C-207ENST00000527720 FAM74A7A6NL05 159 aa13.02□□□□□ -0.32
USH1C-207ENST00000527720 SLC33A1O00400 549 aaPredicted RBP13.02□□□□□ -0.32
USH1C-207ENST00000527720 LYZL6O75951 148 aa13.02□□□□□ -0.32
USH1C-207ENST00000527720 OR2H2O95918 312 aa13.02□□□□□ -0.32
USH1C-207ENST00000527720 COX5AP20674 150 aa13.02□□□□□ -0.32
USH1C-207ENST00000527720 FAM74A3Q4VXF1 159 aa13.02□□□□□ -0.32
USH1C-207ENST00000527720 CLEC9AQ6UXN8 241 aa13.02□□□□□ -0.32
USH1C-207ENST00000527720 GCNT2Q8N0V5 402 aa13.02□□□□□ -0.32
USH1C-207ENST00000527720 OR1J1Q8NGS3 322 aa13.02□□□□□ -0.32
USH1C-207ENST00000527720 WNT2BQ93097 391 aa13.02□□□□□ -0.32
USH1C-207ENST00000527720 PARD6AQ9NPB6 346 aa13.02□□□□□ -0.32
USH1C-207ENST00000527720 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.02□□□□□ -0.33
USH1C-207ENST00000527720 SH2D1BO14796 132 aa13.02□□□□□ -0.33
USH1C-207ENST00000527720 PITX3O75364 302 aa13.02□□□□□ -0.33
USH1C-207ENST00000527720 IGKV3-15P01624 115 aa13.02□□□□□ -0.33
USH1C-207ENST00000527720 HOXC12P31275 282 aa13.02□□□□□ -0.33
USH1C-207ENST00000527720 ZNF154Q13106 437 aa13.02□□□□□ -0.33
USH1C-207ENST00000527720 OR10V1Q8NGI7 309 aa13.02□□□□□ -0.33
USH1C-207ENST00000527720 AKR1E2Q96JD6 320 aa13.02□□□□□ -0.33
USH1C-207ENST00000527720 TMEM231Q9H6L2 316 aa13.02□□□□□ -0.33
USH1C-207ENST00000527720 SPAARA0A1B0GVQ0 90 aa13.01□□□□□ -0.33
USH1C-207ENST00000527720 TOR1AO14656 332 aa13.01□□□□□ -0.33
USH1C-207ENST00000527720 POLR2GP62487 172 aaKnown RBP eCLIP13.01□□□□□ -0.33
USH1C-207ENST00000527720 VAMP2P63027 116 aa13.01□□□□□ -0.33
USH1C-207ENST00000527720 BAXQ07812 192 aa13.01□□□□□ -0.33
USH1C-207ENST00000527720 PSG7Q13046 419 aa13.01□□□□□ -0.33
USH1C-207ENST00000527720 FIP1L1Q6UN15 594 aaKnown RBP13.01□□□□□ -0.33
USH1C-207ENST00000527720 ERRFI1Q9UJM3 462 aaPredicted RBP13.01□□□□□ -0.33
USH1C-207ENST00000527720 A0A1W2PR80 420 aa13.01□□□□□ -0.33
USH1C-207ENST00000527720 NXPH2O95156 264 aa13.01□□□□□ -0.33
USH1C-207ENST00000527720 TSPAN15O95858 294 aa13.01□□□□□ -0.33
USH1C-207ENST00000527720 KIR2DL2P43627 348 aaPredicted RBP13.01□□□□□ -0.33
USH1C-207ENST00000527720 OR8G1Q15617 311 aa13.01□□□□□ -0.33
USH1C-207ENST00000527720 DHRS7BQ6IAN0 325 aaPredicted RBP13.01□□□□□ -0.33
USH1C-207ENST00000527720 MBNL3Q9NUK0 354 aaKnown RBP13.01□□□□□ -0.33
USH1C-207ENST00000527720 CACFD1Q9UGQ2 172 aa13.01□□□□□ -0.33
USH1C-207ENST00000527720 FAM96BQ9Y3D0 163 aa13.01□□□□□ -0.33
USH1C-207ENST00000527720 WIPI2Q9Y4P8 454 aa13.01□□□□□ -0.33
USH1C-207ENST00000527720 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13□□□□□ -0.33
USH1C-207ENST00000527720 FAM24AA6NFZ4 105 aa13□□□□□ -0.33
USH1C-207ENST00000527720 PRR33A8MZF0 331 aa13□□□□□ -0.33
USH1C-207ENST00000527720 H2AFB1P0C5Y9 115 aa13□□□□□ -0.33
USH1C-207ENST00000527720 ERVS71-1P61550 626 aa13□□□□□ -0.33
USH1C-207ENST00000527720 SRSF6Q13247 344 aaKnown RBP13□□□□□ -0.33
USH1C-207ENST00000527720 CNEP1R1Q8N9A8 125 aa13□□□□□ -0.33
USH1C-207ENST00000527720 PLPPR1Q8TBJ4 325 aa13□□□□□ -0.33
USH1C-207ENST00000527720 HES4Q9HCC6 221 aa13□□□□□ -0.33
USH1C-207ENST00000527720 A0A1B0GU03 582 aa13□□□□□ -0.33
USH1C-207ENST00000527720 IGSF23A1L1A6 192 aa13□□□□□ -0.33
USH1C-207ENST00000527720 SIRPB1O00241 398 aa13□□□□□ -0.33
USH1C-207ENST00000527720 CDIPTO14735 213 aa13□□□□□ -0.33
USH1C-207ENST00000527720 SSSCA1O60232 199 aa13□□□□□ -0.33
USH1C-207ENST00000527720 SFTA3P0C7M3 94 aa13□□□□□ -0.33
USH1C-207ENST00000527720 OR8U9P0C7N5 309 aa13□□□□□ -0.33
USH1C-207ENST00000527720 SPINK2P20155 84 aa13□□□□□ -0.33
USH1C-207ENST00000527720 SNCAP37840 140 aa13□□□□□ -0.33
USH1C-207ENST00000527720 CAMLGP49069 296 aa13□□□□□ -0.33
USH1C-207ENST00000527720 NUBP1P53384 320 aa13□□□□□ -0.33
USH1C-207ENST00000527720 CXorf66Q5JRM2 361 aaPredicted RBP13□□□□□ -0.33
USH1C-207ENST00000527720 TMEM252Q8N6L7 170 aa13□□□□□ -0.33
USH1C-207ENST00000527720 OR8U1Q8NH10 309 aa13□□□□□ -0.33
USH1C-207ENST00000527720 SNIP1Q8TAD8 396 aaKnown RBP13□□□□□ -0.33
USH1C-207ENST00000527720 KLF14Q8TD94 323 aaPredicted RBP13□□□□□ -0.33
USH1C-207ENST00000527720 TAAR3PQ9P1P4 343 aa13□□□□□ -0.33
USH1C-207ENST00000527720 TRAPPC2LQ9UL33 140 aa13□□□□□ -0.33
USH1C-207ENST00000527720 FAM157AC9JC47 383 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 SERPINE2P07093 398 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 CD80P33681 288 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 HMGN3Q15651 99 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 WDR31Q8NA23 367 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 OR8G5Q8NG78 346 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 IL1F10Q8WWZ1 152 aa12.99□□□□□ -0.33
USH1C-207ENST00000527720 GPHA2Q96T91 129 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms