RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 ARMCX1Q9P291 453 aa3.65□□□□□ -1.83
CD44-220ENST00000525688 C14orf166Q9Y224 244 aaKnown RBP3.65□□□□□ -1.83
CD44-220ENST00000525688 MYO10Q9HD67 2058 aa3.65□□□□□ -1.83
CD44-220ENST00000525688 MUC6Q6W4X9 2439 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 DMDP11532 3685 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 IGHV3OR16-12A0A075B7B8 117 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 IGKV1D-8A0A087WSZ0 117 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 FAM92AA1XBS5 289 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 DHRS7CA6NNS2 312 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 MFNGO00587 321 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 CDX4O14627 284 aaPredicted RBP3.64□□□□□ -1.83
CD44-220ENST00000525688 CHP2O43745 196 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 CST8O60676 142 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 FOXH1O75593 365 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 IFNA1P01562 189 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 IGHV3-9P01782 118 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 KLK3P07288 261 aaPredicted RBP3.64□□□□□ -1.83
CD44-220ENST00000525688 GIPP09681 153 aaPredicted RBP3.64□□□□□ -1.83
CD44-220ENST00000525688 ZNF883P0CG24 379 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 PGA5P0DJD9 388 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 C1GALT1C1LP0DN25 315 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 CCR7P32248 378 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 GCKP35557 465 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 OR1D4P47884 311 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 GNG3P63215 75 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 SLC35A1P78382 337 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 FAM78AQ5JUQ0 283 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 TNFAIP8L2Q6P589 184 aaPredicted RBP3.64□□□□□ -1.83
CD44-220ENST00000525688 SMARCD3Q6STE5 483 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 GSG1LQ6UXU4 331 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 BAIAP2L2Q6UXY1 529 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 COMMD7Q86VX2 200 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 P2RY8Q86VZ1 359 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 RAB43Q86YS6 212 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 FTMTQ8N4E7 242 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 SMIM20Q8N5G0 67 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 SUMF1Q8NBK3 374 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 OR51G1Q8NGK1 321 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 OR6T1Q8NGN1 323 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 OR51E1Q8TCB6 317 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 RDH5Q92781 318 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 TMEM54Q969K7 222 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 ELSPBP1Q96BH3 223 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 C12orf43Q96C57 262 aaKnown RBP3.64□□□□□ -1.83
CD44-220ENST00000525688 PPCDCQ96CD2 204 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 SMIM12Q96EX1 92 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 PIK3IP1Q96FE7 263 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 BTF3L4Q96K17 158 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 PGLYRP3Q96LB9 341 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 SIGMAR1Q99720 223 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 VGLL1Q99990 258 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 OR11A1Q9GZK7 315 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 GFRA4Q9GZZ7 299 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 GNB4Q9HAV0 340 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 SH2D2AQ9NP31 389 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 SLC7A10Q9NS82 523 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 CISHQ9NSE2 258 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 GSKIPQ9P0R6 139 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 RAB22AQ9UL26 194 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 UFC1Q9Y3C8 167 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 LSM5Q9Y4Y9 91 aaKnown RBP3.64□□□□□ -1.83
CD44-220ENST00000525688 FER1L5A0AVI2 2057 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 LAMA1P25391 3075 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 CFAP54Q96N23 3096 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 PTPRDP23468 1912 aa3.64□□□□□ -1.83
CD44-220ENST00000525688 ZNF318Q5VUA4 2279 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 A0A087WUJ7 227 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 A0A0G2JLM5 398 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 A0A0G2JMP0 313 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 METTL15A6NJ78 407 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 GPR31O00270 319 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 BHLHE40O14503 412 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 CA11O75493 328 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 SCRG1O75711 98 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 CYB5R3P00387 301 aaPredicted RBP3.63□□□□□ -1.83
CD44-220ENST00000525688 RENP00797 406 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 HPNP05981 417 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 MRPL3P09001 348 aaKnown RBP3.63□□□□□ -1.83
CD44-220ENST00000525688 RBMY1CP0DJD4 496 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 HIST1H1TP22492 207 aaPredicted RBP3.63□□□□□ -1.83
CD44-220ENST00000525688 SLC6A1P30531 599 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 RPS9P46781 194 aaKnown RBP3.63□□□□□ -1.83
CD44-220ENST00000525688 VEGFCP49767 419 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 CDC42P60953 191 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 BAXQ07812 192 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 PUDPQ08623 228 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 IRF4Q15306 451 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 C14orf28Q4W4Y0 310 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 TRMT12Q53H54 448 aaKnown RBP3.63□□□□□ -1.83
CD44-220ENST00000525688 SYT6Q5T7P8 510 aaPredicted RBP3.63□□□□□ -1.83
CD44-220ENST00000525688 C1orf195Q5TG92 126 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 KCTD16Q68DU8 428 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 OR2T5Q6IEZ7 315 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 IDO2Q6ZQW0 420 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 RASSF6Q6ZTQ3 369 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 CLEC20AQ6ZU45 233 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 GALNT10Q86SR1 603 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 MAPK1IP1LQ8NDC0 245 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 OR4M2Q8NGB6 313 aa3.63□□□□□ -1.83
CD44-220ENST00000525688 OR52E2Q8NGJ4 325 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms