RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 C8orf4Q9NR00 106 aa4.74□□□□□ -1.65
CCDC90B-204ENST00000525504 SMPD3Q9NY59 655 aaPredicted RBP4.74□□□□□ -1.65
CCDC90B-204ENST00000525504 C11orf21Q9P2W6 132 aa4.74□□□□□ -1.65
CCDC90B-204ENST00000525504 FBXL7Q9UJT9 491 aa4.74□□□□□ -1.65
CCDC90B-204ENST00000525504 PLA2G2DQ9UNK4 145 aa4.74□□□□□ -1.65
CCDC90B-204ENST00000525504 DIMT1Q9UNQ2 313 aaKnown RBP4.74□□□□□ -1.65
CCDC90B-204ENST00000525504 DHDHQ9UQ10 334 aa4.74□□□□□ -1.65
CCDC90B-204ENST00000525504 TENM3Q9P273 2699 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 TRBV5-7A0A0A0MS05 114 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 IRGMA1A4Y4 181 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 G3V4G9 280 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 H0YJX3 145 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 J3QR06 171 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 M0QZK8 103 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 GABRPO00591 440 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 XPNPEP2O43895 674 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 IL1AP01583 271 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 CD1AP06126 327 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 HCKP08631 526 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 OCM2P0CE71 109 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 OCMP0CE72 109 aaPredicted RBP4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 FAM106CPP0CH98 169 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 ZNF44P15621 663 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 C21orf33P30042 268 aaPredicted RBP4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 CEACAM3P40198 252 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 SNU13P55769 128 aaKnown RBP4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 RPS11P62280 158 aaKnown RBP eCLIP4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 ADARB1P78563 741 aaKnown RBP4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 SCN1BQ07699 218 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 EBI3Q14213 229 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 PLA1AQ53H76 456 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 FOXB2Q5VYV0 432 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 TTC23Q5W5X9 447 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 XAF1Q6GPH4 301 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 LAIR2Q6ISS4 152 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 TMPRSS11AQ6ZMR5 421 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 TRAPPC6BQ86SZ2 158 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 CDH26Q8IXH8 852 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 GAPTQ8N292 157 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 PACRGLQ8N7B6 248 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 C11orf44Q8N8P7 122 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 C8orf31Q8N9H6 132 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 OR4F17Q8NGA8 305 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 OR5AU1Q8NGC0 362 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 OR4D6Q8NGJ1 314 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 OR52M1Q8NGK5 317 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 OR13A1Q8NGR1 328 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 OR52N1Q8NH53 320 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 TNFAIP8L1Q8WVP5 186 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 STMN2Q93045 179 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 SMIM19Q96E16 107 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 MRPS24Q96EL2 167 aaKnown RBP4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 AKR1E2Q96JD6 320 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 OR4F4Q96R69 305 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 NKX3-1Q99801 234 aaPredicted RBP4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 MMP28Q9H239 520 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 PPIL3Q9H2H8 161 aaKnown RBP4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 PCDHB16Q9NRJ7 776 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 TAS2R4Q9NYW5 299 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 CALYQ9NYX4 217 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 CLEC2DQ9UHP7 191 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 KIF25Q9UIL4 384 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 PSG11Q9UQ72 335 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 HSPE1-MOB4S4R3N1 261 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 X6R8D5 127 aa4.73□□□□□ -1.65
CCDC90B-204ENST00000525504 MEIKINA0A087WXM9 373 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 C15orf65H3BRN8 121 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 TOR1AO14656 332 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 MAGEB3O15480 346 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 ORC5O43913 435 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 ZNF780AO75290 641 aaPredicted RBP4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 CDRT1O95170 752 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 BAG2O95816 211 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 LALBAP00709 142 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 MT-ND4P03905 459 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 CD2P06729 351 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 CD37P11049 281 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 CD24P25063 80 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 BDKRB2P30411 391 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 ZNF93P35789 620 aaPredicted RBP4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 VDAC2P45880 294 aaPredicted RBP4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 SOX2P48431 317 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 ARHGDIBP52566 201 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 LSAMPQ13449 338 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 ATXN7L3Q14CW9 347 aaPredicted RBP4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 RSU1Q15404 277 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 ZSCAN26Q16670 478 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 Q3ZCU0 254 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 PAN3Q58A45 887 aaKnown RBP4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 YIF1BQ5BJH7 314 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 OR2G6Q5TZ20 316 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 RNLSQ5VYX0 342 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 STEAP3Q658P3 488 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 HIST2H2BDQ6DRA6 164 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 LINC00596Q86U02 117 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 LINC00311Q8N616 119 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 ZNF555Q8NEP9 628 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 PLPPR1Q8TBJ4 325 aa4.72□□□□□ -1.65
CCDC90B-204ENST00000525504 GGHQ92820 318 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms