RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 FOXO1Q12778 655 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 GAPTQ8N292 157 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 NTMQ9P121 344 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 H0YIG0 161 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 ERGP11308 486 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 MPLP40238 635 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 PABPC1L2AQ5JQF8 200 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 SAMD13Q5VXD3 122 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 SUMO2P61956 95 aaKnown RBP12.07□□□□□ -0.48
LRRK1-202ENST00000525284 CLPPQ16740 277 aaPredicted RBP12.07□□□□□ -0.48
LRRK1-202ENST00000525284 PYCR3Q53H96 274 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 TEPPQ6URK8 271 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 METTL26Q96S19 204 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 MAP1LC3AQ9H492 121 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 SMOC1Q9H4F8 434 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 TRAV21A0A0B4J279 112 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 TMEM262E9PQX1 116 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 MMP16P51512 607 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 PTCRAQ6ISU1 281 aaPredicted RBP12.07□□□□□ -0.48
LRRK1-202ENST00000525284 OR2Y1Q8NGV0 311 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 STARD10Q9Y365 291 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 PSMB11A5LHX3 300 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 TYMSP04818 313 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 CKS1BP61024 79 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 TMEM78Q5T7P6 136 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 WFIKKN1Q96NZ8 548 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 THAP10Q9P2Z0 257 aaPredicted RBP12.07□□□□□ -0.48
LRRK1-202ENST00000525284 KCNMB2Q9Y691 235 aa12.07□□□□□ -0.48
LRRK1-202ENST00000525284 ANKRD20A5PA0PJZ0 165 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 CTSDP07339 412 aaPredicted RBP12.06□□□□□ -0.48
LRRK1-202ENST00000525284 FTH1P19P0C7X4 201 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 OR5A1Q8NGJ0 315 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 OR10J6PQ8NGY7 276 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 SLIRPQ9GZT3 109 aaKnown RBP12.06□□□□□ -0.48
LRRK1-202ENST00000525284 TRDCB7Z8K6 153 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 HKR1P10072 659 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 ZNF32P17041 273 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 TM4SF20Q53R12 229 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 OR1P1Q8NH06 330 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 C16orf92Q96LL3 132 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 PCGF1Q9BSM1 259 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 SETD1AO15047 1707 aaKnown RBP12.06□□□□□ -0.48
LRRK1-202ENST00000525284 CROCCQ5TZA2 2017 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 A8MWL6 223 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 MRPL24Q96A35 216 aaKnown RBP12.06□□□□□ -0.48
LRRK1-202ENST00000525284 CXXC4Q9H2H0 198 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 NWD2Q9ULI1 1742 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 CD300CQ08708 224 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 IBA57Q5T440 356 aaKnown RBP12.06□□□□□ -0.48
LRRK1-202ENST00000525284 MRGPRFQ96AM1 343 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 HLA-DRB1P01911 266 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 FOLR2P14207 255 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 PTOV1Q86YD1 416 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 FAM216AQ8WUB2 273 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 DERL1Q9BUN8 251 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 RAB1BQ9H0U4 201 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 BCL2L10Q9HD36 194 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 HSPB7Q9UBY9 170 aa12.06□□□□□ -0.48
LRRK1-202ENST00000525284 CTXND1A0A1B0GTU2 59 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 ZNF707Q96C28 371 aaPredicted RBP12.05□□□□□ -0.48
LRRK1-202ENST00000525284 OR8B2Q96RD0 313 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 IL19Q9UHD0 177 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 MYH4Q9Y623 1939 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 ZFPL1O95159 310 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 PATE4P0C8F1 98 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 PSG6Q00889 435 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 MS4A3Q96HJ5 214 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 CCL28Q9NRJ3 127 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 CRYBB2P43320 205 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 ZNF770Q6IQ21 691 aaPredicted RBP12.05□□□□□ -0.48
LRRK1-202ENST00000525284 DDB2Q92466 427 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 HARBI1Q96MB7 349 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 MRPL18Q9H0U6 180 aaKnown RBP12.05□□□□□ -0.48
LRRK1-202ENST00000525284 C1RLQ9NZP8 487 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 INSIG2Q9Y5U4 225 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 MYH9P35579 1960 aaKnown RBP12.05□□□□□ -0.48
LRRK1-202ENST00000525284 UBR2Q8IWV8 1755 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 GALNSP34059 522 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 SAPCD1Q5SSQ6 148 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 CYB561D1Q8N8Q1 229 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 PRR7Q8TB68 274 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 TRAV8-6A0A0B4J262 113 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 NKX2-6A6NCS4 301 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 TSPAN2O60636 221 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 OR2A4O95047 310 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 RAB1CQ92928 201 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 MS4A4AQ96JQ5 239 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 OR2A7Q96R45 310 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 GPR35Q9HC97 309 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 PEF1Q9UBV8 284 aaKnown RBP12.05□□□□□ -0.48
LRRK1-202ENST00000525284 TBX21Q9UL17 535 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 PRELID3AQ96N28 172 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 TSPAN32Q96QS1 320 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 NUDT16L1Q9BRJ7 211 aaKnown RBP12.05□□□□□ -0.48
LRRK1-202ENST00000525284 TMEM160Q9NX00 188 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 CLN8Q9UBY8 286 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 PHLDA3Q9Y5J5 127 aa12.05□□□□□ -0.48
LRRK1-202ENST00000525284 TGIF2-C20orf24A0A0A6YYL0 155 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 RAG2P55895 527 aa12.04□□□□□ -0.48
LRRK1-202ENST00000525284 CCL4L1Q8NHW4 92 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms