RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 GZMHP20718 246 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 PPP1CCP36873 323 aaKnown RBP11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 NPBWR2P48146 333 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 ACOT6Q3I5F7 207 aaPredicted RBP11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 VMA21Q3ZAQ7 101 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 SLC25A53Q5H9E4 307 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 DCAF12L2Q5VW00 463 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 MRGPRFQ96AM1 343 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 C14orf79Q96F83 325 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 RAB1BQ9H0U4 201 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 MS4A5Q9H3V2 200 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 SMCO4Q9NRQ5 59 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 SOX15O60248 233 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 SLC38A11Q08AI6 406 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 GABRA6Q16445 453 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 RAB1CQ92928 201 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 OR2V2Q96R30 315 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 PFDN5Q99471 154 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 RNF122Q9H9V4 155 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 GNB4Q9HAV0 340 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 RHOFQ9HBH0 211 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 UQCC1Q9NVA1 299 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 ATPIF1Q9UII2 106 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 LIPGQ9Y5X9 500 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 SCN8AQ9UQD0 1980 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 FANCMQ8IYD8 2048 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 LINC00862A6NCI5 91 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 ZNF727A8MUV8 499 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 PRSS44E7EML9 344 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 EFNA2O43921 213 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 CA11O75493 328 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 RAB13P51153 203 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 PHYHD1Q5SRE7 291 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 NR2C2APQ86WQ0 139 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 OR10Z1Q8NGY1 313 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 CORO2AQ92828 525 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 NKX6-2Q9C056 277 aaPredicted RBP11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 PRDM14Q9GZV8 571 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 WNK2Q9Y3S1 2297 aa11.29□□□□□ -0.6
PCDHGB1-201ENST00000523390 MPDZO75970 2070 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 NKX2-6A6NCS4 301 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 F6UZH7 168 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 VWA1Q6PCB0 445 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 KCNIP4Q6PIL6 250 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 CMTM2Q8TAZ6 248 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 ITLN1Q8WWA0 313 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 GPR137Q96N19 417 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 SLX1AQ9BQ83 275 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 IL36GQ9NZH8 169 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 CADP27708 2225 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 A0A1W2PPE3 182 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 CDX4O14627 284 aaPredicted RBP11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 SCTP09683 121 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 CTSSP25774 331 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 PRDX2P32119 198 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 CEBPDP49716 269 aaPredicted RBP11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 IL13RA2Q14627 380 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 MIDNQ504T8 468 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 VAX1Q5SQQ9 334 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 TMEM65Q6PI78 240 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 C1QL2Q7Z5L3 287 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 MRPL13Q9BYD1 178 aaKnown RBP11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 WIPI2Q9Y4P8 454 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 HEATR1Q9H583 2144 aaKnown RBP11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 HEATR5AQ86XA9 2040 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 ZNF708P17019 499 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 RAB5CP51148 216 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 COL10A1Q03692 680 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 OR4A4PQ8NGN8 299 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 KLF14Q8TD94 323 aaPredicted RBP11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 ZNF552Q9H707 407 aaPredicted RBP11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 NUDT19A8MXV4 375 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 ST8SIA5O15466 376 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 CHST1O43916 411 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 MT-ND4LP03901 98 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 TMPRSS3P57727 454 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 UBE2G2P60604 165 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 USF2Q15853 346 aaPredicted RBP11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 ZFP82Q8N141 532 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 NTNG2Q96CW9 530 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 ALX4Q9H161 411 aaPredicted RBP11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 ZNF665Q9H7R5 613 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 SLC35D1Q9NTN3 355 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 PPP1R14DQ9NXH3 145 aa11.28□□□□□ -0.6
PCDHGB1-201ENST00000523390 PINLYPA6NC86 204 aa11.27□□□□□ -0.6
PCDHGB1-201ENST00000523390 TMEM14DPA8MWL7 114 aa11.27□□□□□ -0.6
PCDHGB1-201ENST00000523390 HOXD4P09016 255 aaPredicted RBP11.27□□□□□ -0.6
PCDHGB1-201ENST00000523390 SLC25A4P12235 298 aa11.27□□□□□ -0.6
PCDHGB1-201ENST00000523390 AQP3Q92482 292 aa11.27□□□□□ -0.6
PCDHGB1-201ENST00000523390 GPHA2Q96T91 129 aa11.27□□□□□ -0.6
PCDHGB1-201ENST00000523390 C19orf12Q9NSK7 152 aa11.27□□□□□ -0.6
PCDHGB1-201ENST00000523390 NCBP2LA6PVI3 153 aaKnown RBP11.27□□□□□ -0.61
PCDHGB1-201ENST00000523390 CDK2AP1O14519 115 aa11.27□□□□□ -0.61
PCDHGB1-201ENST00000523390 SYNGR2O43760 224 aa11.27□□□□□ -0.61
PCDHGB1-201ENST00000523390 THBS3P49746 956 aa11.27□□□□□ -0.61
PCDHGB1-201ENST00000523390 ETV3LQ6ZN32 361 aa11.27□□□□□ -0.61
PCDHGB1-201ENST00000523390 HELZP42694 1942 aaKnown RBP11.27□□□□□ -0.61
PCDHGB1-201ENST00000523390 TXNL1O43396 289 aa11.27□□□□□ -0.61
PCDHGB1-201ENST00000523390 OR2H2O95918 312 aa11.27□□□□□ -0.61
PCDHGB1-201ENST00000523390 CLPSP04118 112 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms