RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 IGHV1-69-2A0A0G2JMI3 117 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 TK1P04183 234 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 SOD3P08294 240 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 SULT1A3P0DMM9 295 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 SULT1A4P0DMN0 295 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 KCNJ3P48549 501 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 HERV-K104P61576 105 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 TEX36Q5VZQ5 186 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 MEX3BQ6ZN04 569 aaKnown RBP12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 MRGPRDQ8TDS7 321 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 DCTN5Q9BTE1 182 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 TAF9BQ9HBM6 251 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 OR1A1Q9P1Q5 309 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 ARFGEF3Q5TH69 2177 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 LYNX1G3V0Z9 82 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 PPYP01298 95 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 ZNF728P0DKX0 622 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 LYNX1P0DP58 116 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 ZBTB25P24278 435 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 EIF2B2P49770 351 aaKnown RBP12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 C1orf87Q8N0U7 546 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 FAM216BQ8N7L0 139 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 TMEM185AQ8NFB2 350 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 CASTOR1Q8WTX7 329 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 GAFA1Q96PS6 74 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 SEBOXQ9HB31 216 aaPredicted RBP12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 CBLN4Q9NTU7 201 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 MGAT4CQ9UBM8 478 aa12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 C14orf166Q9Y224 244 aaKnown RBP12.89□□□□□ -0.35
CTNNA1-236ENST00000522792 PPIAL4EA0A075B759 164 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 FAM172BPA6NC97 362 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 PPIAL4DF5H284 164 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 K7N7A8 449 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 LGALS8O00214 317 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 CD8AP01732 235 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 CTXN2P0C2S0 81 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 PPIAL4FP0DN26 164 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 MUC1P15941 1255 aaPredicted RBP12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 ECI1P42126 302 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 PPOXP50336 477 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 EDDM3BP56851 147 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 TAS2R31P59538 309 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 SURF2Q15527 256 aaPredicted RBP12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 HMGN3Q15651 99 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 LYG2Q86SG7 212 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 ZNF561Q8N587 486 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 OR13A1Q8NGR1 328 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 PPP1R35Q8TAP8 253 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 MOB3AQ96BX8 217 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 CABLES2Q9BTV7 478 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 UBTD1Q9HAC8 227 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 KCNIP1Q9NZI2 227 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 MGAT4AQ9UM21 535 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 PPIAL4AQ9Y536 164 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 C9orf170A2RU37 121 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 C12orf77C9JDV5 145 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 SMLR1H3BR10 107 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 MGST3O14880 152 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 DIRAS3O95661 229 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 IL13RA1P78552 427 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 C2orf68Q2NKX9 166 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 LIN54Q6MZP7 749 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 OR1L1Q8NH94 360 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 OR10J5Q8NHC4 309 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 SDSLQ96GA7 329 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 ZNF665Q9H7R5 613 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 PCDHB10Q9UN67 800 aa12.88□□□□□ -0.35
CTNNA1-236ENST00000522792 HRNRQ86YZ3 2850 aaPredicted RBP12.87□□□□□ -0.35
CTNNA1-236ENST00000522792 TRBV6-7A0A0A0MS04 114 aa12.87□□□□□ -0.35
CTNNA1-236ENST00000522792 POM121CA8CG34 1229 aa12.87□□□□□ -0.35
CTNNA1-236ENST00000522792 CTSDP07339 412 aaPredicted RBP12.87□□□□□ -0.35
CTNNA1-236ENST00000522792 SLC9A3R2Q15599 337 aa12.87□□□□□ -0.35
CTNNA1-236ENST00000522792 TMEM128Q5BJH2 165 aa12.87□□□□□ -0.35
CTNNA1-236ENST00000522792 C11orf71Q6IPW1 123 aa12.87□□□□□ -0.35
CTNNA1-236ENST00000522792 ZNF788Q6ZQV5 615 aa12.87□□□□□ -0.35
CTNNA1-236ENST00000522792 FGFRL1Q8N441 504 aa12.87□□□□□ -0.35
CTNNA1-236ENST00000522792 C12orf45Q8N5I9 185 aaPredicted RBP12.87□□□□□ -0.35
CTNNA1-236ENST00000522792 PRR13Q9NZ81 148 aa12.87□□□□□ -0.35
CTNNA1-236ENST00000522792 LAMP3Q9UQV4 416 aa12.87□□□□□ -0.35
CTNNA1-236ENST00000522792 TANC2Q9HCD6 1990 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 DSCAMO60469 2012 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 TRAV38-1A0A0B4J264 116 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 A6NNC1 897 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 GOSR2O14653 212 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 TMPRSS2O15393 492 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 LY6HO94772 140 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 DANCRP0C864 163 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 COL8A2P25067 703 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 CD34P28906 385 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 SSTR5P35346 364 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 NKX2-5P52952 324 aaPredicted RBP12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 HFEQ30201 348 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 PHLDA2Q53GA4 152 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 FAHD2BQ6P2I3 314 aaPredicted RBP12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 OR2AK2Q8NG84 335 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 ZFAND1Q8TCF1 268 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 SECTM1Q8WVN6 248 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 FAHD2AQ96GK7 314 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 CHIAQ9BZP6 476 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 IGKV1D-13A0A0B4J2D9 117 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms