RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 FMO3P31513 532 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 OTX1P32242 354 aaPredicted RBP3.85□□□□□ -1.79
SDCBP-207ENST00000520168 KIR3DL2P43630 455 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 GABRA2P47869 451 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 OR3A4PP47883 348 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 PRKCDQ05655 676 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 TRAM2Q15035 370 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 PTGES3Q15185 160 aaKnown RBP3.85□□□□□ -1.79
SDCBP-207ENST00000520168 NEDD8Q15843 81 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 SNAI3Q3KNW1 292 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF260Q3ZCT1 412 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 LBHQ53QV2 105 aaPredicted RBP3.85□□□□□ -1.79
SDCBP-207ENST00000520168 FGD3Q5JSP0 725 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 SPANXN2Q5MJ10 180 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 GLYATL3Q5SZD4 288 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 UBE2UQ5VVX9 321 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 MEDAGQ5VYS4 303 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 RNLSQ5VYX0 342 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 CST9LP1Q5W188 147 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 SLC18B1Q6NT16 456 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 TEX38Q6PEX7 206 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 RRM2BQ7LG56 351 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 SMIM15Q7Z3B0 74 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 CCDC28AQ8IWP9 274 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 TIGD4Q8IY51 512 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 LINC00518Q8N0U6 118 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 OR6V1Q8N148 313 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 BATF2Q8N1L9 274 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 STX19Q8N4C7 294 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 AQP11Q8NBQ7 271 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 ZNRF1Q8ND25 227 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 OR5T2Q8NGG2 359 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 OR51A7Q8NH64 312 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 OR2AE1Q8NHA4 323 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 CNIH3Q8TBE1 160 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 LINC00476Q8WZB0 136 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 GGHQ92820 318 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 CREB3L1Q96BA8 519 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 PRRC1Q96M27 445 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 Q96M85 177 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 GPX7Q96SL4 187 aaPredicted RBP3.85□□□□□ -1.79
SDCBP-207ENST00000520168 NIPSNAP1Q9BPW8 284 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 COPS4Q9BT78 406 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 FUNDC2Q9BWH2 189 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 TINAGL1Q9GZM7 467 aaPredicted RBP3.85□□□□□ -1.79
SDCBP-207ENST00000520168 NUAK2Q9H093 628 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 RGCCQ9H4X1 137 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 RERGLQ9H628 205 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 KRCC1Q9NPI7 259 aaPredicted RBP3.85□□□□□ -1.79
SDCBP-207ENST00000520168 ACOT13Q9NPJ3 140 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 RASL12Q9NYN1 266 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 DAPK2Q9UIK4 370 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF222Q9UK12 451 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 ADAM18Q9Y3Q7 739 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 RPL36Q9Y3U8 105 aaKnown RBP3.85□□□□□ -1.79
SDCBP-207ENST00000520168 MPC1Q9Y5U8 109 aa3.85□□□□□ -1.79
SDCBP-207ENST00000520168 IGKV1D-17A0A075B6S4 117 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 TRBV2A0A0J9YWF9 115 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 TRBV4-1A0A0J9YWV2 114 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 IRGMA1A4Y4 181 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 GABARAPO95166 117 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 NDUFB2O95178 105 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 APOL3O95236 402 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 SERPINA3P01011 423 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 MT-ND2P03891 347 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 TK1P04183 234 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 CDK1P06493 297 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 HCKP08631 526 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 OR4E1P0C645 316 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 PSG2P11465 335 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 AREGP15514 252 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 CEACAM3P40198 252 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 CDX1P47902 265 aaPredicted RBP3.84□□□□□ -1.79
SDCBP-207ENST00000520168 SERPINB10P48595 397 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 CDK5Q00535 292 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 TSPAN31Q12999 210 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 FHL1Q13642 323 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 FHL3Q13643 280 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 KIR2DS1Q14954 304 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 SNAPC1Q16533 368 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 SMIM21Q3B7S5 101 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 SLX4IPQ5VYV7 408 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 C12orf73Q69YU5 71 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 TMEM200BQ69YZ2 307 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 C10orf99Q6UWK7 81 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF782Q6ZMW2 699 aaPredicted RBP3.84□□□□□ -1.79
SDCBP-207ENST00000520168 RASSF6Q6ZTQ3 369 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 TMPRSS11FQ6ZWK6 438 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 KCTD9Q7L273 389 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 WDR86Q86TI4 376 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 NAA40Q86UY6 237 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 LYPD6Q86Y78 171 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 NRMQ8IXM6 262 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 LNX2Q8N448 690 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 FAM71E2Q8N5Q1 922 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 RNF152Q8N8N0 203 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 POC5Q8NA72 575 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 NHLRC2Q8NBF2 726 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 OR9Q2Q8NGE9 314 aa3.84□□□□□ -1.79
SDCBP-207ENST00000520168 OR8J1Q8NGP2 316 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms