RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ZIM3Q96PE6 472 aa4.73□□□□□ -1.65
CTNNA1-216ENST00000519489 OR10A2Q9H208 303 aa4.73□□□□□ -1.65
CTNNA1-216ENST00000519489 CALYQ9NYX4 217 aa4.73□□□□□ -1.65
CTNNA1-216ENST00000519489 IDI2-AS1Q9NZ38 188 aa4.73□□□□□ -1.65
CTNNA1-216ENST00000519489 SH3GLB1Q9Y371 365 aa4.73□□□□□ -1.65
CTNNA1-216ENST00000519489 ZNF878C9JN71 531 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 NBR2O15453 112 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 ENTPD6O75354 484 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 NDUFA3O95167 84 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 NDUFB2O95178 105 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 SCTP09683 121 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 TCP1P17987 556 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 GPX2P18283 190 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 HNRNPA3P51991 378 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 SNU13P55769 128 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 IL24Q13007 206 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 PAGE3Q5JUK9 113 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 LRIF1Q5T3J3 769 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 BTNL8Q6UX41 500 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 ASRGL1Q7L266 308 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 ZNF573Q86YE8 665 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 RDH10Q8IZV5 341 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 OR2C3Q8N628 320 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 POC5Q8NA72 575 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 NPBQ8NG41 125 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 OR5T1Q8NG75 326 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 OR1L6Q8NGR2 347 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 OR13C5Q8NGS8 318 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 CD300LFQ8TDQ1 290 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 RASSF5Q8WWW0 418 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 GALNT14Q96FL9 552 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 CEP19Q96LK0 163 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 CNN2Q99439 309 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 CADM1Q9BY67 442 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 FBXL15Q9H469 300 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 RGCCQ9H4X1 137 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 SPAG4Q9NPE6 437 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 RBFOX1Q9NWB1 397 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 POLDIP2Q9Y2S7 368 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 SNX13Q9Y5W8 968 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 GMEB1Q9Y692 573 aa4.72□□□□□ -1.65
CTNNA1-216ENST00000519489 A0A087WUV0 522 aaPredicted RBP4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 A6NIN4 97 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 J3KTA2 159 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 SDHDO14521 159 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 OR2H2O95918 312 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 IL1AP01583 271 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 DNAH10OSP0CZ25 163 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 SSTR5P35346 364 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 OPRL1P41146 370 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 YAP1P46937 504 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 ZNF134P52741 427 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 KLF10Q13118 480 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 SNCBQ16143 134 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 TMEM42Q69YG0 159 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 ASCL4Q6XD76 172 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 TRPM8Q7Z2W7 1104 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 KCTD20Q7Z5Y7 419 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 UXS1Q8NBZ7 420 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 OR4C15Q8NGM1 316 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 KCNG3Q8TAE7 436 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 RNF133Q8WVZ7 376 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 ERMAPQ96PL5 475 aaPredicted RBP4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 CST11Q9H112 138 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 Q9N2K0 584 aa4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 RPL36Q9Y3U8 105 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-216ENST00000519489 PPP5D1E7EU14 171 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 LOC110117498-PIK3R3F6TDL0 507 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 ZNF593O00488 134 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 PRODHO43272 600 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 OR2C1O95371 312 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 CA1P00915 261 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 OR3A3P47888 321 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 SLC18A1P54219 525 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 ATP1B3P54709 279 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 GRB2P62993 217 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 ATXN7L3Q14CW9 347 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 ZNF146Q15072 292 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 CDK5R1Q15078 307 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 ANKRD55Q3KP44 614 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 KRBOX4Q5JUW0 171 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 ZNF691Q5VV52 312 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 SLX4IPQ5VYV7 408 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 FAHD1Q6P587 224 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 DPY19L2P2Q6ZN68 376 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 MSANTD1Q6ZTZ1 278 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 LINC00311Q8N616 119 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 SPATA4Q8NEY3 305 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 SORT1Q99523 831 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 ABHD6Q9BV23 337 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 PKIBQ9C010 78 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 RNF167Q9H6Y7 350 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 PTTG2Q9NZH5 202 aa4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 UTP11Q9Y3A2 253 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-216ENST00000519489 CXCR6O00574 342 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 COPEO14579 308 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 NRASP01111 189 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 IGLV3-1P01715 115 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 BCL3P20749 454 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms