RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 BOLA2-SMG1P6H3BVE0 249 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 TP53I11O14683 189 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 SGCEO43556 437 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 LTAP01374 205 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 OR12D1P0DN82 309 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 MP68P56378 58 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 USF2Q15853 346 aaPredicted RBP1.85□□□□□ -2.11
SQLE-202ENST00000518604 NOXRED1Q6NXP6 359 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 SPERTQ8NA61 448 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 OR11G2Q8NGC1 345 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 DDIT4LQ96D03 193 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 MRAP2Q96G30 205 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 SERPINB11Q96P15 392 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 TUBA4BQ9H853 241 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 TAS2R13Q9NYV9 303 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 URGCP-MRPS24S4R325 110 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 KIAA0232Q92628 1395 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 C8orf87E5RJ46 101 aa1.84□□□□□ -2.11
SQLE-202ENST00000518604 KLRC4-KLRK1H3BQV0 150 aa1.84□□□□□ -2.11
SQLE-202ENST00000518604 SNAP29O95721 258 aa1.84□□□□□ -2.11
SQLE-202ENST00000518604 CRABP1P29762 137 aa1.84□□□□□ -2.11
SQLE-202ENST00000518604 RAB2AP61019 212 aa1.84□□□□□ -2.11
SQLE-202ENST00000518604 APOFQ13790 326 aa1.84□□□□□ -2.11
SQLE-202ENST00000518604 TMEM249Q2WGJ8 235 aa1.84□□□□□ -2.11
SQLE-202ENST00000518604 COPS6Q7L5N1 327 aa1.84□□□□□ -2.11
SQLE-202ENST00000518604 MUC15Q8N387 334 aa1.84□□□□□ -2.11
SQLE-202ENST00000518604 OR2V1Q8NHB1 315 aa1.84□□□□□ -2.11
SQLE-202ENST00000518604 CD200R1Q8TD46 325 aa1.84□□□□□ -2.11
SQLE-202ENST00000518604 LMX1AQ8TE12 382 aa1.84□□□□□ -2.11
SQLE-202ENST00000518604 PDCD6IPQ8WUM4 868 aaKnown RBP1.84□□□□□ -2.11
SQLE-202ENST00000518604 PPWD1Q96BP3 646 aaKnown RBP1.84□□□□□ -2.11
SQLE-202ENST00000518604 LRRC19Q9H756 370 aa1.84□□□□□ -2.11
SQLE-202ENST00000518604 COMMD9Q9P000 198 aa1.84□□□□□ -2.11
SQLE-202ENST00000518604 POFUT2Q9Y2G5 429 aa1.84□□□□□ -2.11
SQLE-202ENST00000518604 PHYHO14832 338 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 YKT6O15498 198 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 SLC25A20O43772 301 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 UGT2B11O75310 529 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 EPPINO95925 133 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 GZMHP20718 246 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 SPAM1P38567 509 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 OR10A3P58181 314 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 SKP2Q13309 424 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 OR8G1Q15617 311 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 ZNF181Q2M3W8 571 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 NIPAL1Q6NVV3 410 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 SCXQ7RTU7 201 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 FAM19A3Q7Z5A8 133 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 OR10P1Q8NGE3 313 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 OR4K13Q8NH42 304 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 GPR119Q8TDV5 335 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 GALMQ96C23 342 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 CHMP5Q9NZZ3 219 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 ZNF337Q9Y3M9 751 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 SAMHD1Q9Y3Z3 626 aaKnown RBP1.83□□□□□ -2.12
SQLE-202ENST00000518604 AK9Q5TCS8 1911 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 NUP205Q92621 2012 aa1.83□□□□□ -2.12
SQLE-202ENST00000518604 GOLGA8QA0A0J9YX86 632 aa1.82□□□□□ -2.12
SQLE-202ENST00000518604 C17orf51A8MQB3 221 aa1.82□□□□□ -2.12
SQLE-202ENST00000518604 POLR3GO15318 223 aaPredicted RBP1.82□□□□□ -2.12
SQLE-202ENST00000518604 CRTAPO75718 401 aaPredicted RBP1.82□□□□□ -2.12
SQLE-202ENST00000518604 CSRP1P21291 193 aaKnown RBP1.82□□□□□ -2.12
SQLE-202ENST00000518604 HADHBP55084 474 aaKnown RBP1.82□□□□□ -2.12
SQLE-202ENST00000518604 RAB31Q13636 194 aa1.82□□□□□ -2.12
SQLE-202ENST00000518604 SYCP1Q15431 976 aa1.82□□□□□ -2.12
SQLE-202ENST00000518604 OR10J3Q5JRS4 329 aa1.82□□□□□ -2.12
SQLE-202ENST00000518604 MSRB3Q8IXL7 192 aa1.82□□□□□ -2.12
SQLE-202ENST00000518604 Q8NDZ9 215 aa1.82□□□□□ -2.12
SQLE-202ENST00000518604 MFSD8Q8NHS3 518 aa1.82□□□□□ -2.12
SQLE-202ENST00000518604 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.82□□□□□ -2.12
SQLE-202ENST00000518604 UGT2B28Q9BY64 529 aa1.82□□□□□ -2.12
SQLE-202ENST00000518604 OR51E2Q9H255 320 aa1.82□□□□□ -2.12
SQLE-202ENST00000518604 ZNF286AQ9HBT8 521 aa1.82□□□□□ -2.12
SQLE-202ENST00000518604 ENPP5Q9UJA9 477 aa1.82□□□□□ -2.12
SQLE-202ENST00000518604 K7ERQ8 282 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 CYTH3O43739 400 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 FBP1P09467 338 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 SLC35E2BP0CK96 405 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 RCVRNP35243 200 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 PSG4Q00888 419 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 ZBTB6Q15916 424 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 ACSBG2Q5FVE4 666 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 ZNF767PQ75MW2 155 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 TCF23Q7RTU1 214 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 MTERF4Q7Z6M4 381 aaKnown RBP1.81□□□□□ -2.12
SQLE-202ENST00000518604 C17orf78Q8N4C9 275 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 OR9I1Q8NGQ6 314 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 CYTH2Q99418 400 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 FBXL15Q9H469 300 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 TMEM106BQ9NUM4 274 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 DMAC2Q9NW81 257 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 MTCH2Q9Y6C9 303 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 HSPE1-MOB4S4R3N1 261 aa1.81□□□□□ -2.12
SQLE-202ENST00000518604 FBN1P35555 2871 aaKnown RBP1.8□□□□□ -2.12
SQLE-202ENST00000518604 LTBP2Q14767 1821 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 C17orf98A8MV24 154 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 A8MWP6 167 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 FAM25EA8MYX2 175 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 EFCAB9A8MZ26 197 aa1.8□□□□□ -2.12
SQLE-202ENST00000518604 F5H5T6 163 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms