RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 A0A1B0GTQ1 180 aa0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 TRIM64CA6NLI5 447 aa0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 F8VP50 259 aa0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 TCF21O43680 179 aa0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 GATCO43716 136 aaKnown RBP0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 BCAP31P51572 246 aa0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 GOLGA7BQ2TAP0 167 aa0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 LGALS9CQ6DKI2 356 aa0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 FAM58AQ8N1B3 248 aa0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 OR5T3Q8NGG3 340 aa0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 NXF2Q9GZY0 626 aaKnown RBP0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 ACOT13Q9NPJ3 140 aa0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 LZTFL1Q9NQ48 299 aa0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 ZNF292O60281 2723 aa0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 NESP48681 1621 aa0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 NHSL1Q5SYE7 1610 aa0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 POLQO75417 2590 aa0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 TPRP12270 2363 aaKnown RBP0.96□□□□□ -2.26
SCARNA1-201ENST00000517138 MUC2Q02817 5179 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 RANBP2P49792 3224 aaKnown RBP0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 DNHD1Q96M86 4753 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 KIF13AQ9H1H9 1805 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 IGHV2-26A0A0B4J1V2 119 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 ARGFXA6NJG6 315 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 A8MWP6 167 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 GMDSO60547 372 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 CRYGDP07320 174 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 PTMSP20962 102 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 EMP2P54851 167 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 OR2B6P58173 313 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 C2orf80Q0P641 193 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 TSPAN31Q12999 210 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 SSX7Q7RTT5 188 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 GATD1Q8NB37 220 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 OR51Q1Q8NH59 317 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 CD200R1Q8TD46 325 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 DNAJC27Q9NZQ0 273 aa0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 EIF4G1Q04637 1599 aaKnown RBP0.95□□□□□ -2.26
SCARNA1-201ENST00000517138 RYR3Q15413 4870 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 CA2P00918 260 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 CD8AP01732 235 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 ZNF3P17036 446 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 WDR43Q15061 677 aaKnown RBP eCLIP0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 SDIM1Q6ZPB5 146 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 CLEC20AQ6ZU45 233 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 FAM19A3Q7Z5A8 133 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 BBOF1Q8ND07 529 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 PDCD6IPQ8WUM4 868 aaKnown RBP0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 KIAA1143Q96AT1 154 aaPredicted RBP0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 HSPB9Q9BQS6 159 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 LRRK2Q5S007 2527 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 NCOR2Q9Y618 2525 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 PCF11O94913 1555 aaKnown RBP0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 RYR1P21817 5038 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 ROS1P08922 2347 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 SLX4Q8IY92 1834 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 SCN9AQ15858 1988 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 KIAA2026Q5HYC2 2103 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 FAM208BQ5VWN6 2430 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 CFAP46Q8IYW2 2715 aa0.94□□□□□ -2.26
SCARNA1-201ENST00000517138 UNC80Q8N2C7 3258 aa0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 DNAH12Q6ZR08 3092 aa0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 FREM1Q5H8C1 2179 aa0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 MICAL3Q7RTP6 2002 aa0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 BPTFQ12830 3046 aa0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 NAPSAO96009 420 aa0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 STAG3L3P0CL85 134 aa0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 FAM19A1Q7Z5A9 133 aa0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 TMCO2Q7Z6W1 182 aaPredicted RBP0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 C10orf107Q8IVU9 208 aa0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 SELENOHQ8IZQ5 122 aaKnown RBP0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 DRAXINQ8NBI3 349 aaPredicted RBP0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 OR51L1Q8NGJ5 315 aa0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 VAT1Q99536 393 aa0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 UTP23Q9BRU9 249 aaKnown RBP0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 POMPQ9Y244 141 aa0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 SPTBN5Q9NRC6 3674 aaKnown RBP0.93□□□□□ -2.26
SCARNA1-201ENST00000517138 MED14O60244 1454 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 COL24A1Q17RW2 1714 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 DSCAML1Q8TD84 2053 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 RTEL1-TNFRSF6BF6WH68 1400 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 ENSAO43768 121 aaKnown RBP0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 SOD1P00441 154 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 GPX1P07203 203 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 SRMP19623 302 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 GCLMP48507 274 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 GUSBP1Q15486 140 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 HES3Q5TGS1 186 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 ARHGAP18Q8N392 663 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 ZFAND2AQ8N6M9 145 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 ERMNQ8TAM6 284 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 PEX13Q92968 403 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 ZNF396Q96N95 335 aaPredicted RBP0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 GPR22Q99680 433 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 C16orf95Q9H693 158 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 CHRAC1Q9NRG0 131 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 TBL2Q9Y4P3 447 aaKnown RBP0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 V9GYY9 64 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 UTRNP46939 3433 aa0.92□□□□□ -2.26
SCARNA1-201ENST00000517138 MKI67P46013 3256 aaKnown RBP0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms