RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 ZNF32P17041 273 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 ALOX5APP20292 161 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 RAB3AP20336 220 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 KITLGP21583 273 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC2A5P22732 501 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 HTR1FP30939 366 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 THBS4P35443 961 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 PITPNBP48739 271 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 SRP9P49458 86 aaKnown RBP2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 HOXA1P49639 335 aaPredicted RBP2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 CCR9P51686 369 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 KLF3P57682 345 aaPredicted RBP2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 RAP2BP61225 183 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 SEC61A1P61619 476 aaKnown RBP2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 TSPAN5P62079 268 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 RPS7P62081 194 aaKnown RBP2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 ACTC1P68032 377 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 ACTA1P68133 377 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 S100A12P80511 92 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 HGFACQ04756 655 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 FGL1Q08830 312 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 MALLQ13021 153 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 DYRK1AQ13627 763 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 RSPO1Q2MKA7 263 aaPredicted RBP2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF718Q3SXZ3 478 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 KLHL12Q53G59 568 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 KHDC1LQ5JSQ8 128 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 IDNKQ5T6J7 187 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 LCE2CQ5TA81 110 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF660Q6AZW8 331 aaPredicted RBP2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 PYHIN1Q6K0P9 492 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC18B1Q6NT16 456 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF774Q6NX45 483 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 SFXN4Q6P4A7 337 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 GSG1LQ6UXU4 331 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC16A9Q7RTY1 509 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC36A1Q7Z2H8 476 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 LHFPL3Q86UP9 236 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 KRTAP19-1Q8IUB9 90 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 CPOQ8IVL8 374 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 LRRC18Q8N456 261 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 FTMTQ8N4E7 242 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 SAMD12Q8N8I0 201 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 CYB561A3Q8NBI2 242 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 PLPP7Q8NBV4 271 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 CCDC54Q8NEL0 328 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 BEST4Q8NFU0 473 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 OR5AU1Q8NGC0 362 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 OR51D1Q8NGF3 324 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 OR2T35Q8NGX2 323 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 OR2T27Q8NH04 317 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 OR56B4Q8NH76 319 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 OTOSQ8NHW6 89 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 FGFBP3Q8TAT2 258 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 SYNPRQ8TBG9 265 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 TRMT10AQ8TBZ6 339 aaKnown RBP2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 RPS4Y2Q8TD47 263 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 THEM6Q8WUY1 208 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 SMIM4Q8WVI0 70 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 RAB1CQ92928 201 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 ERGIC1Q969X5 290 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 RNF166Q96A37 237 aaPredicted RBP2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 SPSB4Q96A44 273 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 ORAI1Q96D31 301 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC25A38Q96DW6 304 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 ELMOD3Q96FG2 381 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 MRPL48Q96GC5 212 aaKnown RBP2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 PGLYRP3Q96LB9 341 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 C4orf45Q96LM5 186 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 TSSK2Q96PF2 358 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 INTS14Q96SY0 518 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 SEC22CQ9BRL7 303 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 UQCC2Q9BRT2 126 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 THAP7Q9BT49 309 aaPredicted RBP2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 TMED9Q9BVK6 235 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 C20orf85Q9H1P6 137 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 AUNIPQ9H7T9 357 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 WDR76Q9H967 626 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 ISG20L2Q9H9L3 353 aaKnown RBP2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 CDH20Q9HBT6 801 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 HRASLSQ9HDD0 168 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 PNRC2Q9NPJ4 139 aaKnown RBP2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 HINT3Q9NQE9 182 aaKnown RBP2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 MRPL22Q9NWU5 206 aaKnown RBP2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 RDH8Q9NYR8 311 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 COPZ2Q9P299 210 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF222Q9UK12 451 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 FLVCR2Q9UPI3 526 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 GSTK1Q9Y2Q3 226 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 LHFPL6Q9Y693 200 aa2.47□□□□□ -2.01
SCARNA13-201ENST00000516672 TRAV14DV4A0A0A6YYC5 116 aa2.46□□□□□ -2.02
SCARNA13-201ENST00000516672 TRAV1-2A0A0B4J238 106 aa2.46□□□□□ -2.02
SCARNA13-201ENST00000516672 A0A0U1RQV5 110 aa2.46□□□□□ -2.02
SCARNA13-201ENST00000516672 FAM183AA6NL82 134 aa2.46□□□□□ -2.02
SCARNA13-201ENST00000516672 ANXA2P2A6NMY6 339 aa2.46□□□□□ -2.02
SCARNA13-201ENST00000516672 DHRS7CA6NNS2 312 aa2.46□□□□□ -2.02
SCARNA13-201ENST00000516672 FAM25EA8MYX2 175 aa2.46□□□□□ -2.02
SCARNA13-201ENST00000516672 LINC00587B1AMM8 73 aa2.46□□□□□ -2.02
SCARNA13-201ENST00000516672 TEX46H3BTG2 121 aa2.46□□□□□ -2.02
SCARNA13-201ENST00000516672 H7C1C5 153 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms