RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 FAAP24Q9BTP7 215 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 FBLN5Q9UBX5 448 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 RAB22AQ9UL26 194 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 TRAPPC2LQ9UL33 140 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 KIAA2026Q5HYC2 2103 aa11.34□□□□□ -0.59
USP46-209ENST00000514536 TMEM272A0A1B0GTI8 110 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 NOTOA8MTQ0 251 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 ODF3BA8MYP8 253 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 LDLRAD4O15165 306 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 SOCS1O15524 211 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 CLEC2LP0C7M8 214 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 PAX6P26367 422 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 IER3P46695 156 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 MXD1Q05195 221 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 LTC4SQ16873 150 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 UTF1Q5T230 341 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 ZNF626Q68DY1 528 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 C6orf201Q7Z4U5 140 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 FAM89BQ8N5H3 189 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 SSMEM1Q8WWF3 244 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 SULT4A1Q9BR01 284 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 CLEC7AQ9BXN2 247 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 IDI2-AS1Q9NZ38 188 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 ZNRD1Q9P1U0 126 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 DSCAML1Q8TD84 2053 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 NPIPB11E5RHQ5 1161 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 CLDN34H7C241 214 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 IL1AP01583 271 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 IGHV4-59P01825 116 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 SMIM18P0DKX4 95 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 CFPP27918 469 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 SSTR5P35346 364 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 VEGFCP49767 419 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 TIMM50Q3ZCQ8 353 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 GDPGP1Q6ZNW5 385 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 LDLRAD3Q86YD5 345 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 UBALD1Q8TB05 177 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 ARL11Q969Q4 196 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 KIRREL1Q96J84 757 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 LINC00574Q9H8X3 128 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 ZMAT3Q9HA38 289 aaKnown RBP11.33□□□□□ -0.6
USP46-209ENST00000514536 LIN7BQ9HAP6 207 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 PLEKHJ1Q9NW61 149 aa11.33□□□□□ -0.6
USP46-209ENST00000514536 AIREO43918 545 aa11.32□□□□□ -0.6
USP46-209ENST00000514536 CA11O75493 328 aa11.32□□□□□ -0.6
USP46-209ENST00000514536 IGHV3-7P01780 117 aa11.32□□□□□ -0.6
USP46-209ENST00000514536 RNASE1P07998 156 aaKnown RBP11.32□□□□□ -0.6
USP46-209ENST00000514536 TGFBR1P36897 503 aa11.32□□□□□ -0.6
USP46-209ENST00000514536 EFNB2P52799 333 aa11.32□□□□□ -0.6
USP46-209ENST00000514536 LSM3P62310 102 aaKnown RBP11.32□□□□□ -0.6
USP46-209ENST00000514536 LDLRAD2Q5SZI1 272 aa11.32□□□□□ -0.6
USP46-209ENST00000514536 C16orf87Q6PH81 154 aa11.32□□□□□ -0.6
USP46-209ENST00000514536 RTN4RL2Q86UN3 420 aa11.32□□□□□ -0.6
USP46-209ENST00000514536 GAPTQ8N292 157 aa11.32□□□□□ -0.6
USP46-209ENST00000514536 TMEM86BQ8N661 226 aa11.32□□□□□ -0.6
USP46-209ENST00000514536 BEND2Q8NDZ0 799 aa11.32□□□□□ -0.6
USP46-209ENST00000514536 MEGF9Q9H1U4 602 aa11.32□□□□□ -0.6
USP46-209ENST00000514536 DPAGT1Q9H3H5 408 aa11.32□□□□□ -0.6
USP46-209ENST00000514536 ZNF286AQ9HBT8 521 aa11.32□□□□□ -0.6
USP46-209ENST00000514536 DAPK2Q9UIK4 370 aa11.32□□□□□ -0.6
USP46-209ENST00000514536 TBL2Q9Y4P3 447 aaKnown RBP11.32□□□□□ -0.6
USP46-209ENST00000514536 C15orf65H3BRN8 121 aa11.31□□□□□ -0.6
USP46-209ENST00000514536 TOR1AO14656 332 aa11.31□□□□□ -0.6
USP46-209ENST00000514536 ORC5O43913 435 aa11.31□□□□□ -0.6
USP46-209ENST00000514536 RCC1P18754 421 aaPredicted RBP11.31□□□□□ -0.6
USP46-209ENST00000514536 CD34P28906 385 aa11.31□□□□□ -0.6
USP46-209ENST00000514536 TMEM50BP56557 158 aa11.31□□□□□ -0.6
USP46-209ENST00000514536 SSX2Q16385 188 aa11.31□□□□□ -0.6
USP46-209ENST00000514536 Q6ZTK2 550 aa11.31□□□□□ -0.6
USP46-209ENST00000514536 DYNAPQ8N1N2 210 aa11.31□□□□□ -0.6
USP46-209ENST00000514536 NDNFQ8TB73 568 aa11.31□□□□□ -0.6
USP46-209ENST00000514536 LEAP2Q969E1 77 aa11.31□□□□□ -0.6
USP46-209ENST00000514536 MALSU1Q96EH3 234 aa11.31□□□□□ -0.6
USP46-209ENST00000514536 SSX3Q99909 188 aa11.31□□□□□ -0.6
USP46-209ENST00000514536 CHIAQ9BZP6 476 aa11.31□□□□□ -0.6
USP46-209ENST00000514536 POMT1Q9Y6A1 747 aa11.31□□□□□ -0.6
USP46-209ENST00000514536 A0A087X0M5 115 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 A0A1B0GX30 115 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 FOXI3A8MTJ6 420 aaPredicted RBP11.3□□□□□ -0.6
USP46-209ENST00000514536 HTR1DP28221 377 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 PRRX1P54821 245 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 ACTG1P63261 375 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 MINOS1Q5TGZ0 78 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 SFXN4Q6P4A7 337 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 OR10A7Q8NGE5 316 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 OR56B1Q8NGI3 324 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 OR4P4Q8NGL7 312 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 OR13F1Q8NGS4 319 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 ZNF596Q8TC21 504 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 MRPL30Q8TCC3 161 aaKnown RBP11.3□□□□□ -0.6
USP46-209ENST00000514536 GCDHQ92947 438 aaPredicted RBP11.3□□□□□ -0.6
USP46-209ENST00000514536 ARHGAP5-AS1Q96IT6 56 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 FUNDC2Q9BWH2 189 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 HILPDAQ9Y5L2 63 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 MINOS1-NBL1R4GNA1 71 aa11.3□□□□□ -0.6
USP46-209ENST00000514536 C12orf77C9JDV5 145 aa11.29□□□□□ -0.6
USP46-209ENST00000514536 IGLV1-47P01700 117 aa11.29□□□□□ -0.6
USP46-209ENST00000514536 SNRPBP14678 240 aaKnown RBP11.29□□□□□ -0.6
USP46-209ENST00000514536 RAB6AP20340 208 aa11.29□□□□□ -0.6
USP46-209ENST00000514536 FAM189A2Q15884 450 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 194.8 ms