RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-209ENST00000512130 ACTR1BP42025 376 aa2.9□□□□□ -1.95
LINC01088-209ENST00000512130 PMS2P3Q13401 168 aa2.9□□□□□ -1.95
LINC01088-209ENST00000512130 PAFAH1B3Q15102 231 aaKnown RBP2.9□□□□□ -1.95
LINC01088-209ENST00000512130 ZCWPW2Q504Y3 356 aa2.9□□□□□ -1.95
LINC01088-209ENST00000512130 SPATA24Q86W54 205 aa2.9□□□□□ -1.95
LINC01088-209ENST00000512130 EIF4E3Q8N5X7 224 aaKnown RBP2.9□□□□□ -1.95
LINC01088-209ENST00000512130 APOBEC3DQ96AK3 386 aaPredicted RBP2.9□□□□□ -1.95
LINC01088-209ENST00000512130 REEP6Q96HR9 211 aa2.9□□□□□ -1.95
LINC01088-209ENST00000512130 ZNF391Q9UJN7 358 aa2.9□□□□□ -1.95
LINC01088-209ENST00000512130 FBXL3Q9UKT7 428 aa2.9□□□□□ -1.95
LINC01088-209ENST00000512130 MCTS1Q9ULC4 181 aaKnown RBP2.9□□□□□ -1.95
LINC01088-209ENST00000512130 TBL2Q9Y4P3 447 aaKnown RBP2.9□□□□□ -1.95
LINC01088-209ENST00000512130 SPATA31E1Q6ZUB1 1445 aa2.9□□□□□ -1.95
LINC01088-209ENST00000512130 RRBP1Q9P2E9 1410 aaKnown RBP2.9□□□□□ -1.95
LINC01088-209ENST00000512130 SHROOM3Q8TF72 1996 aa2.9□□□□□ -1.95
LINC01088-209ENST00000512130 GRIN2BQ13224 1484 aa2.9□□□□□ -1.95
LINC01088-209ENST00000512130 ARAP1Q96P48 1450 aa2.9□□□□□ -1.95
LINC01088-209ENST00000512130 MAGI1Q96QZ7 1491 aaPredicted RBP2.9□□□□□ -1.95
LINC01088-209ENST00000512130 ARHGAP35Q9NRY4 1499 aa2.9□□□□□ -1.95
LINC01088-209ENST00000512130 PIK3R4Q99570 1358 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 A6NED7 52 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 TMEM250H0YL14 139 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 H3BMM0 161 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 MKRN2OSH3BPM6 223 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 CBR3O75828 277 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 GYPCP04921 128 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 FOXA1P55317 472 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 MP68P56378 58 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 C1QTNF8P60827 252 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 RAB2AP61019 212 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 DMTNQ08495 405 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 CASP8Q14790 479 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 MMDQ15546 238 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 SLC9A3R2Q15599 337 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 SAMD9Q5K651 1589 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 SPPL2BQ8TCT7 592 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 DYNC2LI1Q8TCX1 351 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 RNASEH2CQ8TDP1 164 aaKnown RBP2.89□□□□□ -1.95
LINC01088-209ENST00000512130 CASKIN1Q8WXD9 1431 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 UBE2WQ96B02 151 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 CMBLQ96DG6 245 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 TRIB3Q96RU7 358 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 OR51E2Q9H255 320 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 C1orf109Q9NX04 203 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 CCDC18Q5T9S5 1454 aa2.89□□□□□ -1.95
LINC01088-209ENST00000512130 SHANK1Q9Y566 2161 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 ADAMTS12P58397 1594 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 TIAM1Q13009 1591 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 C9J4A7 227 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 GPR171O14626 319 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 PSCAO43653 123 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 ZNF708P17019 499 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 TGFBR2P37173 567 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 TAF9Q16594 264 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 CLEC6AQ6EIG7 209 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 TTC33Q6PID6 262 aaPredicted RBP2.88□□□□□ -1.95
LINC01088-209ENST00000512130 SLC13A5Q86YT5 568 aaPredicted RBP2.88□□□□□ -1.95
LINC01088-209ENST00000512130 OR4P4Q8NGL7 312 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 MAL2Q969L2 176 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 IGF2BP2-AS1Q96M15 143 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 PRSS27Q9BQR3 290 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 ZNF251Q9BRH9 671 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 BBS2Q9BXC9 721 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 UGT2B28Q9BY64 529 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 KCNIP2Q9NS61 270 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 CTTNBP2Q8WZ74 1663 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 KIAA0586Q9BVV6 1533 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 UGGT2Q9NYU1 1516 aa2.88□□□□□ -1.95
LINC01088-209ENST00000512130 PRR14LQ5THK1 2151 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 NESP48681 1621 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 A0A1W2PNN7 141 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 GGTLC3B5MD39 225 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 SLC31A1O15431 190 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 SCN2BO60939 215 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 INPP1P49441 399 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 EXOC3L4Q17RC7 722 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 NIT1Q86X76 327 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 MUC15Q8N387 334 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 TMEM56Q96MV1 263 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 FAM210AQ96ND0 272 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 OR2D2Q9H210 308 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 SNAPC4Q5SXM2 1469 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 CFAP43Q8NDM7 1665 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 IQGAP2Q13576 1575 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 RAB3GAP2Q9H2M9 1393 aa2.87□□□□□ -1.95
LINC01088-209ENST00000512130 LRRC9Q6ZRR7 1453 aa2.86□□□□□ -1.95
LINC01088-209ENST00000512130 TMEM213A2RRL7 107 aa2.86□□□□□ -1.95
LINC01088-209ENST00000512130 F5H5K5 113 aa2.86□□□□□ -1.95
LINC01088-209ENST00000512130 MPZL2O60487 215 aa2.86□□□□□ -1.95
LINC01088-209ENST00000512130 BRI3O95415 125 aa2.86□□□□□ -1.95
LINC01088-209ENST00000512130 YEATS4O95619 227 aa2.86□□□□□ -1.95
LINC01088-209ENST00000512130 CPSF4O95639 269 aaKnown RBP2.86□□□□□ -1.95
LINC01088-209ENST00000512130 P0C880 135 aa2.86□□□□□ -1.95
LINC01088-209ENST00000512130 STC1P52823 247 aa2.86□□□□□ -1.95
LINC01088-209ENST00000512130 DLX6P56179 175 aa2.86□□□□□ -1.95
LINC01088-209ENST00000512130 SLAMF1Q13291 335 aa2.86□□□□□ -1.95
LINC01088-209ENST00000512130 SKP2Q13309 424 aa2.86□□□□□ -1.95
LINC01088-209ENST00000512130 MTERF4Q7Z6M4 381 aaKnown RBP2.86□□□□□ -1.95
LINC01088-209ENST00000512130 ZBTB8OSQ8IWT0 167 aa2.86□□□□□ -1.95
LINC01088-209ENST00000512130 KCTD4Q8WVF5 259 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms