RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 GUCA2BQ16661 112 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 RGS21Q2M5E4 152 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 LAIR2Q6ISS4 152 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 ZNF429Q86V71 674 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 MKXQ8IYA7 352 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 HS3ST5Q8IZT8 346 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 CLDN22Q8N7P3 220 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 TMEM105Q8N8V8 129 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 MORN4Q8NDC4 146 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 OR5T3Q8NGG3 340 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 OR51G1Q8NGK1 321 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 OR5D16Q8NGK9 328 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 OR52P1PQ8NH57 321 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 ZNF420Q8TAQ5 688 aaPredicted RBP4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 SLC7A13Q8TCU3 470 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 CYGBQ8WWM9 190 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 CYYR1Q96J86 154 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 DOK1Q99704 481 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 ZNF426Q9BUY5 554 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 CCNB1IP1Q9NPC3 277 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 FBXO8Q9NRD0 319 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 CTPS2Q9NRF8 586 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 C14orf105Q9NVL8 296 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 ZNF226Q9NYT6 803 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 SHPKQ9UHJ6 478 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 PITPNC1Q9UKF7 332 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 TPRKBQ9Y3C4 175 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 KCNE3Q9Y6H6 103 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 V9GYQ6 96 aa4.4□□□□□ -1.71
COL6A4P1-204ENST00000508169 COL5A1P20908 1838 aaPredicted RBP4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 IGHV5-10-1A0A0J9YXX1 117 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 LOC100506127A0A0U1RQW1 187 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 NKX2-6A6NCS4 301 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 XKRYO14609 159 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 BCKDKO14874 412 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 POLR1CO15160 346 aaPredicted RBP4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 RBBP9O75884 186 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 OR2J3O76001 311 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 TSPAN13O95857 204 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 STATHP02808 62 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 OPN1SWP03999 348 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 CLPSP04118 112 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 PIPP12273 146 aaPredicted RBP4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 MGMTP16455 207 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 CNR1P21554 472 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 MDKP21741 143 aaPredicted RBP4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 GABRA3P34903 492 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 POLR2IP36954 125 aaKnown RBP4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 NAA10P41227 235 aaPredicted RBP4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 RBM34P42696 430 aaKnown RBP4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 RPS10P46783 165 aaKnown RBP4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 ZNF136P52737 540 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 CRISP1P54107 249 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 PRRX1P54821 245 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 CTBP2P56545 445 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 SLC35A2P78381 396 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 HPCAP84074 193 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 TSPAN31Q12999 210 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 ECH1Q13011 328 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 MAD2L1BPQ15013 274 aaPredicted RBP4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 TRAM2Q15035 370 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 SAPCD1Q5SSQ6 148 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 THEM4Q5T1C6 240 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 CYB5R2Q6BCY4 276 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 ZNF773Q6PK81 442 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 DEGS2Q6QHC5 323 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 LINC00299Q6ZSB3 139 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 KRTAP11-1Q8IUC1 163 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 HSD17B11Q8NBQ5 300 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 OR52R1Q8NGF1 315 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 OR4D11Q8NGI4 311 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 CDS1Q92903 461 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 RNF185Q96GF1 192 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 Q96MT0 163 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 SLC19A3Q9BZV2 496 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 C6orf62Q9GZU0 229 aaPredicted RBP4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 RACGAP1Q9H0H5 632 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 DNTTIP1Q9H147 329 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 ING2Q9H160 280 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 WDR54Q9H977 334 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 CACYBPQ9HB71 228 aaKnown RBP4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 ZNF160Q9HCG1 818 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 FGF20Q9NP95 211 aaPredicted RBP4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 ZNF331Q9NQX6 463 aaPredicted RBP4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 UBQLN4Q9NRR5 601 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 SCN3BQ9NY72 215 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 COL6A3P12111 3177 aa4.39□□□□□ -1.71
COL6A4P1-204ENST00000508169 A0A087WUU8 490 aa4.38□□□□□ -1.71
COL6A4P1-204ENST00000508169 TRBV11-1A0A0K0K1C0 115 aa4.38□□□□□ -1.71
COL6A4P1-204ENST00000508169 A0A1W2PQD3 144 aa4.38□□□□□ -1.71
COL6A4P1-204ENST00000508169 TRAPPC13A5PLN9 417 aa4.38□□□□□ -1.71
COL6A4P1-204ENST00000508169 ZNF860A6NHJ4 632 aa4.38□□□□□ -1.71
COL6A4P1-204ENST00000508169 CLIC3O95833 236 aa4.38□□□□□ -1.71
COL6A4P1-204ENST00000508169 OMPP47874 163 aa4.38□□□□□ -1.71
COL6A4P1-204ENST00000508169 NMUP48645 174 aa4.38□□□□□ -1.71
COL6A4P1-204ENST00000508169 LHX2P50458 406 aa4.38□□□□□ -1.71
COL6A4P1-204ENST00000508169 TMBIM6P55061 237 aa4.38□□□□□ -1.71
COL6A4P1-204ENST00000508169 CDC42P60953 191 aa4.38□□□□□ -1.71
COL6A4P1-204ENST00000508169 ACTA2P62736 377 aa4.38□□□□□ -1.71
COL6A4P1-204ENST00000508169 ACTG2P63267 376 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms