RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 FAM90A24PP0C7X0 464 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 UBBP0CG47 229 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 CPEP16870 476 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 GZMHP20718 246 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 PSMA1P25786 263 aaKnown RBP12.51□□□□□ -0.41
MED28-204ENST00000506409 KIR2DS4P43632 304 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 ARHGDIBP52566 201 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 RPS25P62851 125 aaKnown RBP12.51□□□□□ -0.41
MED28-204ENST00000506409 TRAM1Q15629 374 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 TBCEQ15813 527 aaPredicted RBP12.51□□□□□ -0.41
MED28-204ENST00000506409 RAB12Q6IQ22 244 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 DTX3Q8N9I9 347 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 OR10A7Q8NGE5 316 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 OR2T6Q8NHC8 308 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 Q96M66 194 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 MGLLQ99685 303 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 MMP28Q9H239 520 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 SIGLEC9Q9Y336 463 aa12.51□□□□□ -0.41
MED28-204ENST00000506409 AIPO00170 330 aa12.5□□□□□ -0.41
MED28-204ENST00000506409 IGHV3-7P01780 117 aa12.5□□□□□ -0.41
MED28-204ENST00000506409 MT-ND4P03905 459 aa12.5□□□□□ -0.41
MED28-204ENST00000506409 BRS3P32247 399 aa12.5□□□□□ -0.41
MED28-204ENST00000506409 C1orf100Q5SVJ3 147 aa12.5□□□□□ -0.41
MED28-204ENST00000506409 ZNF497Q6ZNH5 498 aa12.5□□□□□ -0.41
MED28-204ENST00000506409 TMEM91Q6ZNR0 172 aa12.5□□□□□ -0.41
MED28-204ENST00000506409 CCDC107Q8WV48 283 aa12.5□□□□□ -0.41
MED28-204ENST00000506409 LEAP2Q969E1 77 aa12.5□□□□□ -0.41
MED28-204ENST00000506409 ETAA1Q9NY74 926 aa12.5□□□□□ -0.41
MED28-204ENST00000506409 PSG11Q9UQ72 335 aa12.5□□□□□ -0.41
MED28-204ENST00000506409 AMMECR1Q9Y4X0 333 aaPredicted RBP12.5□□□□□ -0.41
MED28-204ENST00000506409 PEX16Q9Y5Y5 336 aa12.5□□□□□ -0.41
MED28-204ENST00000506409 MGAM2Q2M2H8 2515 aa12.49□□□□□ -0.41
MED28-204ENST00000506409 H3BUI4 141 aa12.49□□□□□ -0.41
MED28-204ENST00000506409 J3QR06 171 aa12.49□□□□□ -0.41
MED28-204ENST00000506409 ARL6IP5O75915 188 aa12.49□□□□□ -0.41
MED28-204ENST00000506409 MPIG6BO95866 241 aa12.49□□□□□ -0.41
MED28-204ENST00000506409 FUT3P21217 361 aa12.49□□□□□ -0.41
MED28-204ENST00000506409 EFNB2P52799 333 aa12.49□□□□□ -0.41
MED28-204ENST00000506409 TPTE2P1Q5T6R2 138 aa12.49□□□□□ -0.41
MED28-204ENST00000506409 CCDC144NLQ6NUI1 221 aa12.49□□□□□ -0.41
MED28-204ENST00000506409 C11orf88Q6PI97 169 aa12.49□□□□□ -0.41
MED28-204ENST00000506409 ZNF367Q7RTV3 350 aa12.49□□□□□ -0.41
MED28-204ENST00000506409 ARL11Q969Q4 196 aa12.49□□□□□ -0.41
MED28-204ENST00000506409 RPEQ96AT9 228 aa12.49□□□□□ -0.41
MED28-204ENST00000506409 Q9H521 79 aa12.49□□□□□ -0.41
MED28-204ENST00000506409 OOSP1A8MZH6 123 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 LY6LH3BQJ8 138 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 C15orf65H3BRN8 121 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 TIMM23O14925 209 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 SLC22A1O15245 554 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 ORC5O43913 435 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 GLAP06280 429 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 VSIG8P0DPA2 414 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 CD24P25063 80 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 HTR2CP28335 458 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 MNDAP41218 407 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 GNG10P50151 68 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 GABARAPL2P60520 117 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 SYT6Q5T7P8 510 aaPredicted RBP12.48□□□□□ -0.41
MED28-204ENST00000506409 SIGIRRQ6IA17 410 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 OR10K2Q6IF99 312 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 SLC16A12Q6ZSM3 486 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 OR6M1Q8NGM8 313 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 UBALD1Q8TB05 177 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 TOMM40LQ969M1 308 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 TMEM59Q9BXS4 323 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 ZNF702PQ9H963 129 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 ACOT13Q9NPJ3 140 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 TRAPPC2LQ9UL33 140 aa12.48□□□□□ -0.41
MED28-204ENST00000506409 UBE2QL1A1L167 161 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 M0QZ24 198 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 SDCBPO00560 298 aaPredicted RBP12.47□□□□□ -0.41
MED28-204ENST00000506409 PDCD6O75340 191 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 CA11O75493 328 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 CALRP27797 417 aaKnown RBP12.47□□□□□ -0.41
MED28-204ENST00000506409 FABP5Q01469 135 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 MADCAM1Q13477 382 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 NKAPLQ5M9Q1 402 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 C6orf183Q5T699 404 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 TREML4Q6UXN2 200 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 OR52M1Q8NGK5 317 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 OR10X1Q8NGY0 326 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 OR4K15Q8NH41 348 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 KCNG3Q8TAE7 436 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 PRSS22Q9GZN4 317 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 PLGRKTQ9HBL7 147 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 RAB9BQ9NP90 201 aa12.47□□□□□ -0.41
MED28-204ENST00000506409 A0A1W2PPE3 182 aa12.46□□□□□ -0.41
MED28-204ENST00000506409 C12orf77C9JDV5 145 aa12.46□□□□□ -0.41
MED28-204ENST00000506409 SPINT2O43291 252 aa12.46□□□□□ -0.41
MED28-204ENST00000506409 DENRO43583 198 aaKnown RBP12.46□□□□□ -0.41
MED28-204ENST00000506409 MRPS14O60783 128 aaKnown RBP12.46□□□□□ -0.41
MED28-204ENST00000506409 BPNT1O95861 308 aa12.46□□□□□ -0.41
MED28-204ENST00000506409 CD37P11049 281 aa12.46□□□□□ -0.41
MED28-204ENST00000506409 RPS27AP62979 156 aaKnown RBP12.46□□□□□ -0.41
MED28-204ENST00000506409 EMX1Q04741 257 aaPredicted RBP12.46□□□□□ -0.41
MED28-204ENST00000506409 HABP2Q14520 560 aaPredicted RBP12.46□□□□□ -0.41
MED28-204ENST00000506409 SSX1Q16384 188 aa12.46□□□□□ -0.41
MED28-204ENST00000506409 Q6ZTK2 550 aa12.46□□□□□ -0.41
MED28-204ENST00000506409 GAPTQ8N292 157 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms