RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 LIME1Q9H400 295 aa6.78□□□□□ -1.32
COL4A5-208ENST00000505728 ESRP2Q9H6T0 727 aaKnown RBP6.78□□□□□ -1.32
COL4A5-208ENST00000505728 RAB18Q9NP72 206 aa6.78□□□□□ -1.32
COL4A5-208ENST00000505728 OR14J1Q9UGF5 321 aa6.78□□□□□ -1.32
COL4A5-208ENST00000505728 OPN4Q9UHM6 478 aa6.78□□□□□ -1.32
COL4A5-208ENST00000505728 ERRFI1Q9UJM3 462 aaPredicted RBP6.78□□□□□ -1.32
COL4A5-208ENST00000505728 PAIP2BQ9ULR5 123 aaKnown RBP6.78□□□□□ -1.32
COL4A5-208ENST00000505728 PDZD2O15018 2839 aa6.78□□□□□ -1.32
COL4A5-208ENST00000505728 FBN2P35556 2912 aa6.78□□□□□ -1.32
COL4A5-208ENST00000505728 DYSFO75923 2080 aa6.78□□□□□ -1.32
COL4A5-208ENST00000505728 ANKHD1Q8IWZ3 2542 aaKnown RBP6.78□□□□□ -1.32
COL4A5-208ENST00000505728 ANKRD17O75179 2603 aaKnown RBP6.77□□□□□ -1.33
COL4A5-208ENST00000505728 ARFGEF3Q5TH69 2177 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 ARID1AO14497 2285 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 TRBV6-7A0A0A0MS04 114 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 IGHV3-64DA0A0J9YX35 117 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 TEX13DA0A0J9YY54 714 aaPredicted RBP6.77□□□□□ -1.33
COL4A5-208ENST00000505728 TMEM30CPA0ZSE6 113 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 CRYM-AS1A6NIL9 109 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 RFPL4AA6NLU0 287 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 HMSDA8MTL9 139 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 C3orf80F5H4A9 247 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 RFPL4AL1F8VTS6 287 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 G3V3Q6 166 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 HSPB6O14558 160 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 WNT9BO14905 357 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 RGS13O14921 159 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 PPYP01298 95 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 CD8AP01732 235 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 IGHV1-46P01743 117 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 CD3EP07766 207 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 CD55P08174 381 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 RPS2P15880 293 aaKnown RBP6.77□□□□□ -1.33
COL4A5-208ENST00000505728 PI3P19957 117 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 C4BPBP20851 252 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 NFYAP23511 347 aaPredicted RBP6.77□□□□□ -1.33
COL4A5-208ENST00000505728 PRDX2P32119 198 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 RBMXP38159 391 aaKnown RBP6.77□□□□□ -1.33
COL4A5-208ENST00000505728 PIGPP57054 158 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 RND3P61587 244 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 SUPT4H1P63272 117 aaKnown RBP6.77□□□□□ -1.33
COL4A5-208ENST00000505728 ADORA2A-AS1P86434 159 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 PAX5Q02548 391 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 BAMBIQ13145 260 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 SLC9A3R2Q15599 337 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 ADIPOQQ15848 244 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 IGSF11Q5DX21 431 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 DCAF12L2Q5VW00 463 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 GSG1LQ6UXU4 331 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 C20orf204Q6ZNR8 217 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 KCTD9Q7L273 389 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 MOGAT3Q86VF5 341 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 C9orf62Q8N4C0 152 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 OR11L1Q8NGX0 322 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 Q8TCH9 128 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 GALNT14Q96FL9 552 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 SNX22Q96L94 193 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 OR2V2Q96R30 315 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 VRK1Q99986 396 aaPredicted RBP6.77□□□□□ -1.33
COL4A5-208ENST00000505728 NCOR1P1Q9H4R4 102 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 KCNJ16Q9NPI9 418 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 MBNL3Q9NUK0 354 aaKnown RBP6.77□□□□□ -1.33
COL4A5-208ENST00000505728 KCNIP1Q9NZI2 227 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 COMMD9Q9P000 198 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 RNF7Q9UBF6 113 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 DNAJB11Q9UBS4 358 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 TRAPPC2LQ9UL33 140 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 HSPB11Q9Y547 144 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 DSCAMO60469 2012 aa6.77□□□□□ -1.33
COL4A5-208ENST00000505728 IGKV1-6A0A0C4DH72 117 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 C5orf51A6NDU8 294 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 OOEPA6NGQ2 149 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 FAM90A27PA6NNH2 459 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 C17orf100A8MU93 164 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 SHISA9B4DS77 424 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 GPR31O00270 319 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 BET1O15155 118 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 PSPNO60542 156 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 IFNA2P01563 188 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 OR4A8P0C604 315 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 PSG2P11465 335 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 RCC1P18754 421 aaPredicted RBP6.76□□□□□ -1.33
COL4A5-208ENST00000505728 TNFRSF1AP19438 455 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 S100GP29377 79 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 FXYD4P59646 89 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 COL10A1Q03692 680 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 HERPUD1Q15011 391 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 HMGN3Q15651 99 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 ANKRD55Q3KP44 614 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 LGALSLQ3ZCW2 172 aaPredicted RBP6.76□□□□□ -1.33
COL4A5-208ENST00000505728 Q5BKY6 102 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 BEX5Q5H9J7 111 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 FAM209AQ5JX71 171 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 C6orf183Q5T699 404 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 TMEM65Q6PI78 240 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 TRAT1Q6PIZ9 186 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 H1FOOQ8IZA3 346 aaPredicted RBP6.76□□□□□ -1.33
COL4A5-208ENST00000505728 GCSAMQ8N6F7 178 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 CD177Q8N6Q3 437 aa6.76□□□□□ -1.33
COL4A5-208ENST00000505728 ZNF565Q8N9K5 539 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms