RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 C18orf12Q96KH6 178 aa16.27■□□□□ 0.2
SCAMP3-209ENST00000497470 ZNF714Q96N38 554 aa16.27■□□□□ 0.2
SCAMP3-209ENST00000497470 ZMAT3Q9HA38 289 aaKnown RBP16.27■□□□□ 0.2
SCAMP3-209ENST00000497470 AKIP1Q9NQ31 210 aa16.27■□□□□ 0.2
SCAMP3-209ENST00000497470 TAS2R8Q9NYW2 309 aa16.27■□□□□ 0.2
SCAMP3-209ENST00000497470 ITGB1BP2Q9UKP3 347 aa16.27■□□□□ 0.2
SCAMP3-209ENST00000497470 MRPS7Q9Y2R9 242 aaKnown RBP16.27■□□□□ 0.2
SCAMP3-209ENST00000497470 RBMX2Q9Y388 322 aaKnown RBP16.27■□□□□ 0.2
SCAMP3-209ENST00000497470 A0A0G2JMP0 313 aa16.26■□□□□ 0.19
SCAMP3-209ENST00000497470 A0A0X1KG70 313 aa16.26■□□□□ 0.19
SCAMP3-209ENST00000497470 SSX5O60225 188 aa16.26■□□□□ 0.19
SCAMP3-209ENST00000497470 CTXN2P0C2S0 81 aa16.26■□□□□ 0.19
SCAMP3-209ENST00000497470 HTD2P86397 168 aa16.26■□□□□ 0.19
SCAMP3-209ENST00000497470 OR52W1Q6IF63 320 aa16.26■□□□□ 0.19
SCAMP3-209ENST00000497470 TCF23Q7RTU1 214 aa16.26■□□□□ 0.19
SCAMP3-209ENST00000497470 GLCCI1Q86VQ1 547 aa16.26■□□□□ 0.19
SCAMP3-209ENST00000497470 TEX29Q8N6K0 151 aa16.26■□□□□ 0.19
SCAMP3-209ENST00000497470 OR4M2Q8NGB6 313 aa16.26■□□□□ 0.19
SCAMP3-209ENST00000497470 FCAMRQ8WWV6 532 aa16.26■□□□□ 0.19
SCAMP3-209ENST00000497470 MSI2Q96DH6 328 aaKnown RBP16.26■□□□□ 0.19
SCAMP3-209ENST00000497470 MTFP1Q9UDX5 166 aa16.26■□□□□ 0.19
SCAMP3-209ENST00000497470 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.26■□□□□ 0.197e-9■□□□□ 10.7
SCAMP3-209ENST00000497470 A0A1W2PQ09 198 aa16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 C15orf65H3BRN8 121 aa16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 F2RL2O00254 374 aa16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 SPINT2O43291 252 aa16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 TBPP20226 339 aa16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 CD40LGP29965 261 aa16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 RCVRNP35243 200 aa16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 LCN2P80188 198 aa16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 FGFRL1Q8N441 504 aa16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 C11orf42Q8N5U0 333 aa16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 OR4A4PQ8NGN8 299 aa16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 OR13A1Q8NGR1 328 aa16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 TMUB1Q9BVT8 246 aa16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 TOLLIPQ9H0E2 274 aa16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 METTL8Q9H825 291 aaKnown RBP16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 ZNF286AQ9HBT8 521 aa16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 CHMP1AQ9HD42 196 aaPredicted RBP16.25■□□□□ 0.19
SCAMP3-209ENST00000497470 CR1P17927 2039 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 A0A087X0M5 115 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 A0A1B0GX30 115 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 TRDCB7Z8K6 153 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 RBBP9O75884 186 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 INHBBP09529 407 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 PRTN3P24158 256 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 LSAMPQ13449 338 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 ZNF79Q15937 498 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 STEAP3Q658P3 488 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 SNX29P2Q8IUI4 249 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 IZUMO1Q8IYV9 350 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 FAM185AQ8N0U4 392 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 MFSD4AQ8N468 514 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 OR4K15Q8NH41 348 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 NUDCD2Q8WVJ2 157 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 WDR12Q9GZL7 423 aaKnown RBP16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 TAF9BQ9HBM6 251 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 CALYQ9NYX4 217 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 MED13LQ71F56 2210 aa16.24■□□□□ 0.19
SCAMP3-209ENST00000497470 RCC1P18754 421 aaPredicted RBP16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 CD34P28906 385 aa16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 PPP5CP53041 499 aa16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 HLA-DRB3P79483 266 aa16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 ZNF273Q14593 569 aa16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 C17orf58Q2M2W7 97 aa16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 TRAPPC6BQ86SZ2 158 aa16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 RTN4RL2Q86UN3 420 aa16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 TPRX1Q8N7U7 411 aa16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 C8orf31Q8N9H6 132 aa16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 GALMQ96C23 342 aa16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 CABLES2Q9BTV7 478 aa16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 CCDC32Q9BV29 185 aa16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 SRRQ9GZT4 340 aa16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 SIRPDQ9H106 197 aa16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 ELF5Q9UKW6 265 aaPredicted RBP16.23■□□□□ 0.19
SCAMP3-209ENST00000497470 C12orf77C9JDV5 145 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 ITGB1BP1O14713 200 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 CD5LO43866 347 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 MMP9P14780 707 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 FPR2P25090 351 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 GLP1RP43220 463 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 ERVFRD-1P60508 538 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 ACTBL2Q562R1 376 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 DCAF12L2Q5VW00 463 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 Q6ZPA2 131 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 CIARTQ8N365 385 aaPredicted RBP16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 BEST4Q8NFU0 473 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 MRGPRDQ8TDS7 321 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 ARL11Q969Q4 196 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 HDHD3Q9BSH5 251 aaPredicted RBP16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 MMP26Q9NRE1 261 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 HIF1ANQ9NWT6 349 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 TMEM160Q9NX00 188 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 ANXA10Q9UJ72 324 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 JPT1Q9UK76 154 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 ITPR3Q14573 2671 aa16.22■□□□□ 0.19
SCAMP3-209ENST00000497470 MEIOCA2RUB1 952 aa16.21■□□□□ 0.19
SCAMP3-209ENST00000497470 FABP7O15540 132 aa16.21■□□□□ 0.19
SCAMP3-209ENST00000497470 TGFAP01135 160 aa16.21■□□□□ 0.19
SCAMP3-209ENST00000497470 GSTT2BP0CG30 244 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms