RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 A0A1W2PPE3 182 aa13.58□□□□□ -0.24
SMC4-226ENST00000497311 IGKV1D-33P01593 117 aa13.58□□□□□ -0.24
SMC4-226ENST00000497311 IGKV1-33P01594 117 aa13.58□□□□□ -0.24
SMC4-226ENST00000497311 BDKRB2P30411 391 aa13.58□□□□□ -0.24
SMC4-226ENST00000497311 CAPGP40121 348 aa13.58□□□□□ -0.24
SMC4-226ENST00000497311 RBM11P57052 281 aaKnown RBP13.58□□□□□ -0.24
SMC4-226ENST00000497311 OR2G6Q5TZ20 316 aa13.58□□□□□ -0.24
SMC4-226ENST00000497311 LINC00596Q86U02 117 aa13.58□□□□□ -0.24
SMC4-226ENST00000497311 NOL4LQ96MY1 436 aaPredicted RBP13.58□□□□□ -0.24
SMC4-226ENST00000497311 VCXQ9H320 206 aa13.58□□□□□ -0.24
SMC4-226ENST00000497311 NKX1-2Q9UD57 310 aaPredicted RBP13.58□□□□□ -0.24
SMC4-226ENST00000497311 TMEM30CPA0ZSE6 113 aa13.57□□□□□ -0.24
SMC4-226ENST00000497311 IRGMA1A4Y4 181 aa13.57□□□□□ -0.24
SMC4-226ENST00000497311 SERPINE3A8MV23 424 aa13.57□□□□□ -0.24
SMC4-226ENST00000497311 CCRL2O00421 344 aa13.57□□□□□ -0.24
SMC4-226ENST00000497311 HSD17B6O14756 317 aa13.57□□□□□ -0.24
SMC4-226ENST00000497311 GEMIN2O14893 280 aaKnown RBP13.57□□□□□ -0.24
SMC4-226ENST00000497311 ZNF780AO75290 641 aaPredicted RBP13.57□□□□□ -0.24
SMC4-226ENST00000497311 GAPDHP04406 335 aaKnown RBP13.57□□□□□ -0.24
SMC4-226ENST00000497311 SERPINA2P20848 420 aa13.57□□□□□ -0.24
SMC4-226ENST00000497311 ZNF816Q0VGE8 651 aaPredicted RBP13.57□□□□□ -0.24
SMC4-226ENST00000497311 ATAD3CQ5T2N8 411 aa13.57□□□□□ -0.24
SMC4-226ENST00000497311 LINC00482Q8N8I6 264 aa13.57□□□□□ -0.24
SMC4-226ENST00000497311 SMIM19Q96E16 107 aa13.57□□□□□ -0.24
SMC4-226ENST00000497311 BABAM2Q9NXR7 383 aa13.57□□□□□ -0.24
SMC4-226ENST00000497311 SIRT4Q9Y6E7 314 aaPredicted RBP13.57□□□□□ -0.24
SMC4-226ENST00000497311 K7EIL1 84 aa13.56□□□□□ -0.24
SMC4-226ENST00000497311 OGG1O15527 345 aa13.56□□□□□ -0.24
SMC4-226ENST00000497311 IGHG2P01859 326 aa13.56□□□□□ -0.24
SMC4-226ENST00000497311 RPL23AP62750 156 aaKnown RBP13.56□□□□□ -0.24
SMC4-226ENST00000497311 SLC35B1P78383 322 aa13.56□□□□□ -0.24
SMC4-226ENST00000497311 RIPK1Q13546 671 aa13.56□□□□□ -0.24
SMC4-226ENST00000497311 MPV17LQ2QL34 196 aa13.56□□□□□ -0.24
SMC4-226ENST00000497311 SLC35E3Q7Z769 313 aa13.56□□□□□ -0.24
SMC4-226ENST00000497311 MOB3BQ86TA1 216 aa13.56□□□□□ -0.24
SMC4-226ENST00000497311 MRPL41Q8IXM3 137 aaKnown RBP13.56□□□□□ -0.24
SMC4-226ENST00000497311 C8orf59Q8N0T1 100 aaPredicted RBP13.56□□□□□ -0.24
SMC4-226ENST00000497311 OR52M1Q8NGK5 317 aa13.56□□□□□ -0.24
SMC4-226ENST00000497311 NEK7Q8TDX7 302 aa13.56□□□□□ -0.24
SMC4-226ENST00000497311 ARL11Q969Q4 196 aa13.56□□□□□ -0.24
SMC4-226ENST00000497311 ORAI1Q96D31 301 aa13.56□□□□□ -0.24
SMC4-226ENST00000497311 GPR61Q9BZJ8 451 aa13.56□□□□□ -0.24
SMC4-226ENST00000497311 ZFP57Q9NU63 452 aa13.56□□□□□ -0.24
SMC4-226ENST00000497311 LINC00527Q9UJ94 153 aa13.56□□□□□ -0.24
SMC4-226ENST00000497311 EXOSC1Q9Y3B2 195 aaKnown RBP13.56□□□□□ -0.24
SMC4-226ENST00000497311 IGHV1-3A0A0C4DH29 117 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 C15orf65H3BRN8 121 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 SDCBPO00560 298 aaPredicted RBP13.55□□□□□ -0.24
SMC4-226ENST00000497311 ORC5O43913 435 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 GNAO1P09471 354 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 GTF2F2P13984 249 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 MYL12AP19105 171 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 REG1BP48304 166 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 THBS3P49746 956 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 KRTAP10-11P60412 298 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 EBI3Q14213 229 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 SLC22A6Q4U2R8 563 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 DEFB121Q5J5C9 76 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 ETV3LQ6ZN32 361 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 OR2W3Q7Z3T1 314 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 FOXRED2Q8IWF2 684 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 LINC00311Q8N616 119 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 OR13C5Q8NGS8 318 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 CCDC107Q8WV48 283 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 DPF1Q92782 380 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 ZNF184Q99676 751 aaPredicted RBP13.55□□□□□ -0.24
SMC4-226ENST00000497311 CHCHD3Q9NX63 227 aaKnown RBP13.55□□□□□ -0.24
SMC4-226ENST00000497311 CKLFQ9UBR5 152 aa13.55□□□□□ -0.24
SMC4-226ENST00000497311 DIMT1Q9UNQ2 313 aaKnown RBP13.55□□□□□ -0.24
SMC4-226ENST00000497311 IGHV3-72A0A0B4J1Y9 119 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 A0A1W2PP11 408 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 NCBP2LA6PVI3 153 aaKnown RBP13.54□□□□□ -0.24
SMC4-226ENST00000497311 NUDT19A8MXV4 375 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 IGFBP3P17936 291 aaPredicted RBP13.54□□□□□ -0.24
SMC4-226ENST00000497311 IL3RAP26951 378 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 SLC6A1P30531 599 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 EGFEM1PQ0D2K5 195 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 MED21Q13503 144 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 GPR176Q14439 515 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 STX19Q8N4C7 294 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 COMMD1Q8N668 190 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 C8orf31Q8N9H6 132 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 UBALD1Q8TB05 177 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 FBLIM1Q8WUP2 373 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 GHSRQ92847 366 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 EAF1Q96JC9 268 aaPredicted RBP13.54□□□□□ -0.24
SMC4-226ENST00000497311 GFOD1Q9NXC2 390 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 CLEC2DQ9UHP7 191 aa13.54□□□□□ -0.24
SMC4-226ENST00000497311 IGHV3-43A0A0B4J1X8 118 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 TRBV5-5A0A0J9YX44 114 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 WI2-2373I1.2A0A1W2PRP0 233 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 AIPO00170 330 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 GPX5O75715 221 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 LALBAP00709 142 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 MT-ND4P03905 459 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 IGHV3-43DP0DP04 118 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 HOXD3P31249 432 aaPredicted RBP13.53□□□□□ -0.24
SMC4-226ENST00000497311 Q499Y3 187 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 YIF1BQ5BJH7 314 aa13.53□□□□□ -0.24
SMC4-226ENST00000497311 DMKNQ6E0U4 476 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms