RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 RAB2AP61019 212 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 DHRS2Q13268 280 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 PMS2P3Q13401 168 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 EXOC3L4Q17RC7 722 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 KRTAP25-1Q3LHN0 102 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 PYCR3Q53H96 274 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 BRD3OSQ6XYD6 125 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 MTERF4Q7Z6M4 381 aaKnown RBP1.99□□□□□ -2.09
SMC4-225ENST00000497203 MUC15Q8N387 334 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 OR4P4Q8NGL7 312 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 SPPL2BQ8TCT7 592 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 RNASEH2CQ8TDP1 164 aaKnown RBP1.99□□□□□ -2.09
SMC4-225ENST00000497203 SLC25A44Q96H78 314 aaPredicted RBP1.99□□□□□ -2.09
SMC4-225ENST00000497203 IGF2BP2-AS1Q96M15 143 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 NDEL1Q9GZM8 345 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 OR51E2Q9H255 320 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 FBXL15Q9H469 300 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 ASCL3Q9NQ33 180 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 C1orf109Q9NX04 203 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 ZNF443Q9Y2A4 671 aaPredicted RBP1.99□□□□□ -2.09
SMC4-225ENST00000497203 ARAP3Q8WWN8 1544 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 TMEM94Q12767 1356 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 PIK3R4Q99570 1358 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 RAB3GAP2Q9H2M9 1393 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 ZSWIM8A7E2V4 1837 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 A6NED7 52 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 C9J4A7 227 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 C8orf87E5RJ46 101 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 F5H5K5 113 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 GPR171O14626 319 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 PLXNB1O43157 2135 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 AQP9O43315 295 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 SYNGR1O43759 233 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 BRI3O95415 125 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 RAB36O95755 333 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 PSKH1P11801 424 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 PVALBP20472 110 aaPredicted RBP1.98□□□□□ -2.09
SMC4-225ENST00000497203 STC1P52823 247 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 FAM3AP98173 230 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 GTF2BQ00403 316 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 TTC33Q6PID6 262 aaPredicted RBP1.98□□□□□ -2.09
SMC4-225ENST00000497203 SLC13A5Q86YT5 568 aaPredicted RBP1.98□□□□□ -2.09
SMC4-225ENST00000497203 KRTCAP2Q8N6L1 136 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 LY6G5BQ8NDX9 201 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 KCTD4Q8WVF5 259 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 TMEM56Q96MV1 263 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 B9D2Q9BPU9 175 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 HIGD2AQ9BW72 106 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 KCNIP2Q9NS61 270 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 FBXL3Q9UKT7 428 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 U3KQK5 164 aa1.98□□□□□ -2.09
SMC4-225ENST00000497203 MYO15BQ96JP2 1530 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 NUP153P49790 1475 aaKnown RBP1.97□□□□□ -2.09
SMC4-225ENST00000497203 IGHV3OR15-7A0A075B7D8 119 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 SH2D1AO60880 128 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 SOX14O95416 240 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 EPPINO95925 133 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 OPN1SWP03999 348 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 EVI2BP34910 448 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 DLX6P56179 175 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 SLAMF1Q13291 335 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 SKP2Q13309 424 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 WDR59Q6PJI9 974 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 CYHR1Q6ZMK1 362 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 FAM19A3Q7Z5A8 133 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 OR4A5Q8NH83 315 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 FAM210AQ96ND0 272 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 ZNF251Q9BRH9 671 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 ARL6Q9H0F7 186 aa1.97□□□□□ -2.09
SMC4-225ENST00000497203 ZNF230Q9UIE0 474 aaPredicted RBP1.97□□□□□ -2.09
SMC4-225ENST00000497203 A0A1B0GU33 70 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 TOX3O15405 576 aaPredicted RBP1.96□□□□□ -2.1
SMC4-225ENST00000497203 EEF1E1O43324 174 aaKnown RBP1.96□□□□□ -2.1
SMC4-225ENST00000497203 MPZL2O60487 215 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 YEATS4O95619 227 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 CTLA4P16410 223 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 HENMT1Q5T8I9 393 aaKnown RBP1.96□□□□□ -2.1
SMC4-225ENST00000497203 NIPAL1Q6NVV3 410 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 TCF24Q7RTU0 167 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 TCF23Q7RTU1 214 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 ZBTB8OSQ8IWT0 167 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 OR11L1Q8NGX0 322 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 OR5K1Q8NHB7 308 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 OR5P3Q8WZ94 311 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 HIST1H2BAQ96A08 127 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 GALMQ96C23 342 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 SMIM12Q96EX1 92 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 TSSK6Q9BXA6 273 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 TMEM216Q9P0N5 145 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 OR5V1Q9UGF6 321 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 RPUSD1Q9UJJ7 312 aaKnown RBP1.96□□□□□ -2.1
SMC4-225ENST00000497203 ZNF407Q9C0G0 2248 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 NACADO15069 1562 aa1.96□□□□□ -2.1
SMC4-225ENST00000497203 H3BSA7 217 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 TOR1AO14656 332 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 DENRO43583 198 aaKnown RBP1.95□□□□□ -2.1
SMC4-225ENST00000497203 CALUO43852 315 aaPredicted RBP1.95□□□□□ -2.1
SMC4-225ENST00000497203 CDS2O95674 445 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 LTAP01374 205 aa1.95□□□□□ -2.1
SMC4-225ENST00000497203 FBP1P09467 338 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms