RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 AGTR1P30556 359 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 CXCL5P42830 114 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 GZMMP51124 257 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 CCL23P55773 120 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 SPCS3P61009 180 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 RAB5BP61020 215 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 HPCAP84074 193 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 RPL19P84098 196 aaKnown RBP3.16□□□□□ -1.9
SNX13-211ENST00000496855 GTF2BQ00403 316 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 CDK5Q00535 292 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 PSG4Q00888 419 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 TRMT12Q53H54 448 aaKnown RBP3.16□□□□□ -1.9
SNX13-211ENST00000496855 FAM222AQ5U5X8 452 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 SHISA6Q6ZSJ9 500 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 MARCH3Q86UD3 253 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 OR2Z1Q8NG97 314 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 OR2T4Q8NH00 348 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 CYGBQ8WWM9 190 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 OR2M2Q96R28 347 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 GGTLC1Q9BX51 225 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 ZNF717Q9BY31 904 aaPredicted RBP3.16□□□□□ -1.9
SNX13-211ENST00000496855 LINC00597Q9H2U6 94 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 CDC42EP4Q9H3Q1 356 aaKnown RBP3.16□□□□□ -1.9
SNX13-211ENST00000496855 SND1-IT1Q9HBX3 110 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 FAM49BQ9NUQ9 324 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 PARVAQ9NVD7 372 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 C14orf166Q9Y224 244 aaKnown RBP3.16□□□□□ -1.9
SNX13-211ENST00000496855 INSIG2Q9Y5U4 225 aa3.16□□□□□ -1.9
SNX13-211ENST00000496855 NACADO15069 1562 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 PDS5BQ9NTI5 1447 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 FUOMA2VDF0 154 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 K7EQS6 105 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 UPK2O00526 184 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 CDK9P50750 372 aaKnown RBP3.15□□□□□ -1.91
SNX13-211ENST00000496855 SLC35A2P78381 396 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 DAZ2Q13117 558 aaKnown RBP3.15□□□□□ -1.91
SNX13-211ENST00000496855 GINS1Q14691 196 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 IRF4Q15306 451 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 CENPWQ5EE01 88 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 ELP2Q6IA86 826 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 GLYATQ6IB77 296 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 Q6ZRU5 148 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 Q6ZSR6 202 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 VN1R4Q7Z5H5 301 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 SLC51BQ86UW2 128 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 RNF175Q8N4F7 328 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 SUMF2Q8NBJ7 301 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 OR2D3Q8NGH3 330 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 OR1J4Q8NGS1 313 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 ABHD3Q8WU67 409 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 TNFAIP8L1Q8WVP5 186 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 SLC35B4Q969S0 331 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 LINC00477Q96M19 166 aa3.15□□□□□ -1.91
SNX13-211ENST00000496855 HSD17B10Q99714 261 aaKnown RBP3.15□□□□□ -1.91
SNX13-211ENST00000496855 MRPL20Q9BYC9 149 aaKnown RBP3.15□□□□□ -1.91
SNX13-211ENST00000496855 PARP12Q9H0J9 701 aaKnown RBP3.15□□□□□ -1.91
SNX13-211ENST00000496855 DAZ3Q9NR90 486 aaKnown RBP3.15□□□□□ -1.91
SNX13-211ENST00000496855 ZNF706Q9Y5V0 76 aaPredicted RBP3.15□□□□□ -1.91
SNX13-211ENST00000496855 KIF21AQ7Z4S6 1674 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 A0A0U1RQV1 116 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 LAD1O00515 517 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 SS18L1O75177 396 aaPredicted RBP3.14□□□□□ -1.91
SNX13-211ENST00000496855 SNRPAP09012 282 aaKnown RBP3.14□□□□□ -1.91
SNX13-211ENST00000496855 MYL12AP19105 171 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 H2BFSP57053 126 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 TNFRSF9Q07011 255 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 ADIGQ0VDE8 80 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 ERCC8Q13216 396 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 EDDM3AQ14507 147 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 SPA17Q15506 151 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 TMEM97Q5BJF2 176 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 ACSBG2Q5FVE4 666 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 ZNF773Q6PK81 442 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 SMIM15Q7Z3B0 74 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 CALHM3Q86XJ0 350 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 C1orf158Q8N1D5 194 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 OR4M1Q8NGD0 313 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 OR10G4Q8NGN3 311 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 OR4X1Q8NH49 305 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 TMEM158Q8WZ71 300 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 SNF8Q96H20 258 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 FGF23Q9GZV9 251 aaPredicted RBP3.14□□□□□ -1.91
SNX13-211ENST00000496855 DCSTAMPQ9H295 470 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 OR52D1Q9H346 318 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 PARP11Q9NR21 331 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 TAS2R7Q9NYW3 318 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 CARHSP1Q9Y2V2 147 aaKnown RBP3.14□□□□□ -1.91
SNX13-211ENST00000496855 CACNG2Q9Y698 323 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 WSB1Q9Y6I7 421 aa3.14□□□□□ -1.91
SNX13-211ENST00000496855 NOTCH2Q04721 2471 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 SCN2AQ99250 2005 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 CCDC180Q9P1Z9 1646 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 PLCH2O75038 1416 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 IGHV2-26A0A0B4J1V2 119 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 C5orf63A6NC05 138 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 FAM159BA6NKW6 160 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 PLIN3O60664 434 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 IFNA14P01570 189 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 NMUP48645 174 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms