RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 SLC9A3R2Q15599 337 aa13.72□□□□□ -0.21
HLA-A-208ENST00000496081 Q5BKY6 102 aa13.72□□□□□ -0.21
HLA-A-208ENST00000496081 C11orf88Q6PI97 169 aa13.72□□□□□ -0.21
HLA-A-208ENST00000496081 TGIF2LYQ8IUE0 185 aa13.72□□□□□ -0.21
HLA-A-208ENST00000496081 ASCC1Q8N9N2 400 aaKnown RBP13.72□□□□□ -0.21
HLA-A-208ENST00000496081 OR11H4Q8NGC9 324 aa13.72□□□□□ -0.21
HLA-A-208ENST00000496081 KIRREL1Q96J84 757 aa13.72□□□□□ -0.21
HLA-A-208ENST00000496081 HYLS1Q96M11 299 aa13.72□□□□□ -0.21
HLA-A-208ENST00000496081 CABLES2Q9BTV7 478 aa13.72□□□□□ -0.21
HLA-A-208ENST00000496081 CLEC4MQ9H2X3 399 aaPredicted RBP13.72□□□□□ -0.21
HLA-A-208ENST00000496081 CISD1Q9NZ45 108 aaKnown RBP13.72□□□□□ -0.21
HLA-A-208ENST00000496081 KIF25Q9UIL4 384 aa13.72□□□□□ -0.21
HLA-A-208ENST00000496081 MGAT4AQ9UM21 535 aa13.72□□□□□ -0.21
HLA-A-208ENST00000496081 PKDREJQ9NTG1 2253 aa13.72□□□□□ -0.21
HLA-A-208ENST00000496081 CFAP46Q8IYW2 2715 aa13.72□□□□□ -0.21
HLA-A-208ENST00000496081 TRBV6-7A0A0A0MS04 114 aa13.71□□□□□ -0.21
HLA-A-208ENST00000496081 DEFB108AA8MXU0 73 aa13.71□□□□□ -0.21
HLA-A-208ENST00000496081 DIRAS3O95661 229 aa13.71□□□□□ -0.21
HLA-A-208ENST00000496081 CYB5R3P00387 301 aaPredicted RBP13.71□□□□□ -0.21
HLA-A-208ENST00000496081 LOXP28300 417 aaPredicted RBP13.71□□□□□ -0.21
HLA-A-208ENST00000496081 TESK1Q15569 626 aa13.71□□□□□ -0.21
HLA-A-208ENST00000496081 EFNB3Q15768 340 aa13.71□□□□□ -0.21
HLA-A-208ENST00000496081 KCTD9Q7L273 389 aa13.71□□□□□ -0.21
HLA-A-208ENST00000496081 OR11L1Q8NGX0 322 aa13.71□□□□□ -0.21
HLA-A-208ENST00000496081 FAM222BQ8WU58 562 aa13.71□□□□□ -0.21
HLA-A-208ENST00000496081 OPN4Q9UHM6 478 aa13.71□□□□□ -0.21
HLA-A-208ENST00000496081 CHD6Q8TD26 2715 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 CRYM-AS1A6NIL9 109 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 DBX1A6NMT0 343 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 CLDN14O95500 239 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 HLA-GP17693 338 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 DNASE1P24855 282 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 GABRA2P47869 451 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 PIGPP57054 158 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 HMGN3Q15651 99 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 FAM209AQ5JX71 171 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 SLC38A6Q8IZM9 456 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 ZNF808Q8N4W9 903 aaPredicted RBP13.71□□□□□ -0.22
HLA-A-208ENST00000496081 OR5M8Q8NGP6 311 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 OR10J5Q8NHC4 309 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 ANGPTL6Q8NI99 470 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 ITLN2Q8WWU7 325 aaPredicted RBP13.71□□□□□ -0.22
HLA-A-208ENST00000496081 PIK3IP1Q96FE7 263 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 TMEM204Q9BSN7 226 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 RSRP1Q9BUV0 290 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 TAF9BQ9HBM6 251 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 DCAF16Q9NXF7 216 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 PRR13Q9NZ81 148 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 BOLA1Q9Y3E2 137 aa13.71□□□□□ -0.22
HLA-A-208ENST00000496081 B9A039 149 aa13.7□□□□□ -0.22
HLA-A-208ENST00000496081 CCSO14618 274 aa13.7□□□□□ -0.22
HLA-A-208ENST00000496081 GLIPR1P48060 266 aa13.7□□□□□ -0.22
HLA-A-208ENST00000496081 PAX5Q02548 391 aa13.7□□□□□ -0.22
HLA-A-208ENST00000496081 ANKRD55Q3KP44 614 aa13.7□□□□□ -0.22
HLA-A-208ENST00000496081 KRBOX4Q5JUW0 171 aa13.7□□□□□ -0.22
HLA-A-208ENST00000496081 PRR18Q8N4B5 295 aa13.7□□□□□ -0.22
HLA-A-208ENST00000496081 IL1F10Q8WWZ1 152 aa13.7□□□□□ -0.22
HLA-A-208ENST00000496081 EGLN1Q9GZT9 426 aa13.7□□□□□ -0.22
HLA-A-208ENST00000496081 DYNLRB1Q9NP97 96 aa13.7□□□□□ -0.22
HLA-A-208ENST00000496081 SLC2A9Q9NRM0 540 aa13.7□□□□□ -0.22
HLA-A-208ENST00000496081 PLSCR3Q9NRY6 295 aa13.7□□□□□ -0.22
HLA-A-208ENST00000496081 KIAA2026Q5HYC2 2103 aa13.7□□□□□ -0.22
HLA-A-208ENST00000496081 DSCAMO60469 2012 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 FAM208BQ5VWN6 2430 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 A0A0B4J2A0 478 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 IRF2P14316 349 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 ZNF672Q499Z4 452 aaPredicted RBP13.69□□□□□ -0.22
HLA-A-208ENST00000496081 ABCA11PQ4W5N1 156 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 PHLDA2Q53GA4 152 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 LAMTOR1Q6IAA8 161 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 LPCAT3Q6P1A2 487 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 SGPP2Q8IWX5 399 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 H1FOOQ8IZA3 346 aaPredicted RBP13.69□□□□□ -0.22
HLA-A-208ENST00000496081 TPRX1Q8N7U7 411 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 ZNRF1Q8ND25 227 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 UBALD1Q8TB05 177 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 SNX22Q96L94 193 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 MS4A5Q9H3V2 200 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 SAP30LQ9HAJ7 183 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 OR1A1Q9P1Q5 309 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 SHPKQ9UHJ6 478 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 MAB21L2Q9Y586 359 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 ARFGEF3Q5TH69 2177 aa13.69□□□□□ -0.22
HLA-A-208ENST00000496081 IGKV1D-13A0A0B4J2D9 117 aa13.68□□□□□ -0.22
HLA-A-208ENST00000496081 TEX13DA0A0J9YY54 714 aaPredicted RBP13.68□□□□□ -0.22
HLA-A-208ENST00000496081 NPIPB11E5RHQ5 1161 aa13.68□□□□□ -0.22
HLA-A-208ENST00000496081 IFNA2P01563 188 aa13.68□□□□□ -0.22
HLA-A-208ENST00000496081 IGKV1-13P0DP09 117 aa13.68□□□□□ -0.22
HLA-A-208ENST00000496081 AGAP20933 346 aa13.68□□□□□ -0.22
HLA-A-208ENST00000496081 GNRHRP30968 328 aa13.68□□□□□ -0.22
HLA-A-208ENST00000496081 STUMQ69YW2 141 aa13.68□□□□□ -0.22
HLA-A-208ENST00000496081 COQ8AQ8NI60 647 aa13.68□□□□□ -0.22
HLA-A-208ENST00000496081 RTN4IP1Q8WWV3 396 aaPredicted RBP13.68□□□□□ -0.22
HLA-A-208ENST00000496081 ASB13Q8WXK3 278 aa13.68□□□□□ -0.22
HLA-A-208ENST00000496081 KCNIP1Q9NZI2 227 aa13.68□□□□□ -0.22
HLA-A-208ENST00000496081 OR2W1Q9Y3N9 320 aa13.68□□□□□ -0.22
HLA-A-208ENST00000496081 SPTBN1Q01082 2364 aaKnown RBP13.68□□□□□ -0.22
HLA-A-208ENST00000496081 OOEPA6NGQ2 149 aa13.68□□□□□ -0.22
HLA-A-208ENST00000496081 C12orf77C9JDV5 145 aa13.68□□□□□ -0.22
HLA-A-208ENST00000496081 SRSF4Q08170 494 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms